Re: [gmx-users] Gromacs installation on GPU

2017-03-15 Thread Mark Abraham
Hi, The more simple way to cater for all possibilities is to configure with GPU support the first time. mdrun observes whether there are actually GPUs at run time and executes accordingly. But as Justin says, this requires that you install CUDA when you might not use it, which is usually more inco

Re: [gmx-users] Gromacs installation on GPU

2017-03-15 Thread Justin Lemkul
On 3/15/17 8:43 AM, Andrew Bostick wrote: Dear Gromacs users, I had installed gromacs using following commands: tar xvf cmake-3.6.1.tar.gz tar xvzf gromacs-5.1.3.tar.gz cd ../cmake-3.6.1. ./configure make make install cd ../gromacs-5.1.3 mkdir build cd build cmake .. -DGMX_BUILD_OWN_FFTW=ON

Re: [gmx-users] Gromacs installation on GPU

2016-08-10 Thread Szilárd Páll
http://manual.gromacs.org/documentation/2016/install-guide/index.html#cuda-gpu-acceleration -- Szilárd On Wed, Aug 10, 2016 at 11:47 AM, Atila Petrosian wrote: > *Dear* *Szilárd, * > > *Thanks for your answer,* > >> There's the issue. You need to tell the build > >> system where CUDA is, e.g. b

Re: [gmx-users] Gromacs installation on GPU

2016-08-09 Thread Szilárd Páll
On Tue, Aug 9, 2016 at 2:06 PM, Atila Petrosian wrote: > Dear gromacs users, > > I am installing gromacs in my system. My computational system is Rocks > 6.1.1. > > I encountered with following: > > [root@me build]# cmake .. -DGMX_BUILD_OWN_FFTW=ON -DGMX_MPI=ON -DGMX_GPU=ON > > -- The C compiler

Re: [gmx-users] Gromacs installation on GPU

2016-08-09 Thread Nikhil Maroli
Dear Atila, You need to install CUDA toolkit to access the GPU facility .you can get it from here https://developer.nvidia.com/cuda-toolkit GeForce GTX 480 Is an old card,i dont know how much you can achieve using this . -- Gromacs Users mailing list * Please search the archive at http://www.g