sharlatan pushed a commit to branch master
in repository guix.
commit fb2d58b81d6b41769330d305d27edded67db091e
Author: Sharlatan Hellseher <sharlata...@gmail.com>
AuthorDate: Sat Apr 20 21:53:00 2024 +0100
gnu: python-asdf: Adjust inputs.
python-asdf requires python-semantic-version during runtime which may be
reproduced by:
guix shell python-asdf python -- python3 -c 'import asdf'
<...>
ModuleNotFoundError: No module named 'semantic_version'
* gnu/packages/astronomy.scm (python-asdf): Adjust inputs.
[native-inputs]: Remove python-semantic-version.
[propagated-inputs]: Add python-semantic-version.
(python-asdf-astropy, python-asdf-compression,
python-asdf-coordinates-schemas,
python-asdf-wcs-schemas, python-asdf-zarr, python-astroalignn,
python-ccdproc,
python-crds, python-ginga, python-gwcs, python-photutils, python-rad,
python-reproject, python-roman-datamodels, python-spectral-cube,
python-specutils, python-stcal, python-stdatamodels, python-stpipe,
python-stsynphot, python-sunpy, python-synphot, python-tweakwcs): Remove
python-semantic-version from native or propagated inputs.
Change-Id: I96bf57f77c327f4ff208e0b173e84bcdd4c287da
Reported-by: Iliya Tikhonenko <tikhone...@mpe.mpg.de>
---
gnu/packages/astronomy.scm | 41 +++++++++--------------------------------
1 file changed, 9 insertions(+), 32 deletions(-)
diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm
index 47a8517b58..ff2275739f 100644
--- a/gnu/packages/astronomy.scm
+++ b/gnu/packages/astronomy.scm
@@ -522,8 +522,7 @@ in FITS files.")
python-shapely))
(native-inputs
(list python-pytest-astropy
- python-pytest-mpl
- python-semantic-version))
+ python-pytest-mpl))
(home-page "http://aplpy.github.io";)
(synopsis "Astronomical Plotting Library in Python")
(description
@@ -753,7 +752,6 @@ Python.")
python-docutils
python-pytest-astropy
python-pytest-astropy-header
- python-semantic-version
python-tornado))
(home-page "https://ejeschke.github.io/ginga/";)
(synopsis "Scientific image viewer and toolkit for FITS files")
@@ -2014,8 +2012,7 @@ is independent of and does not use @code{casacore}.")
(build-system pyproject-build-system)
(native-inputs
(list python-memory-profiler
- python-pytest-astropy
- python-semantic-version))
+ python-pytest-astropy))
(propagated-inputs
(list python-astropy
python-astroscrappy
@@ -2138,7 +2135,6 @@ monochromatic sequential colormaps like @code{blue},
@code{green}, and
python-nose
python-pylint
python-pytest
- python-semantic-version
python-setuptools-scm))
(home-page "https://hst-crds.stsci.edu";)
(synopsis "Calibration Reference Data System for HST and JWST")
@@ -2481,7 +2477,6 @@ setup(ext_modules=get_extensions())")))))
python-extension-helpers
python-pytest-astropy
python-pytest-xdist
- python-semantic-version
python-setuptools-scm))
(home-page "https://github.com/astropy/photutils";)
(synopsis "Source detection and photometry")
@@ -2792,7 +2787,6 @@ setup(ext_modules=get_extensions())")))))
python-pytest-astropy
python-pytest-xdist
;; python-sunpy ; circular dependencies, test optional
- python-semantic-version
python-setuptools-scm))
(home-page "https://reproject.readthedocs.io";)
(synopsis "Astronomical image reprojection in Python")
@@ -2909,7 +2903,6 @@ python_files = test_*.py"))))))))
python-reproject
python-scikit-image
python-scipy
- python-semantic-version
;; python-spiceypy ; Not packed yet in Guix, long jorney.
python-sqlalchemy
python-tqdm
@@ -3069,7 +3062,6 @@ elevation, solar azimuth, rahukaalam, and the phases of
the moon.")
python-pytest-astropy
python-pytest-xdist
python-regions
- python-semantic-version
python-setuptools-scm))
(home-page "https://spectral-cube.readthedocs.io/en/latest/";)
(synopsis "Library for reading and analyzing astrophysical spectral data
cubes")
@@ -3124,7 +3116,6 @@ of axis order, spatial projections, and spectral units
that exist in the wild.
(native-inputs
(list python-matplotlib
python-pytest-astropy
- python-semantic-version
python-setuptools-scm
python-spectral-cube))
(home-page "https://specutils.readthedocs.io/";)
@@ -3322,7 +3313,6 @@ image processing functions: @code{xyxymatch},
@code{geomap}.")
python-pytest
python-pytest-cov
python-pytest-doctestplus
- python-semantic-version
python-setuptools-scm))
(home-page "https://github.com/spacetelescope/stcal";)
(synopsis "STScI tools and algorithms used in calibration pipelines")
@@ -3364,7 +3354,6 @@ image processing functions: @code{xyxymatch},
@code{geomap}.")
python-pytest-doctestplus
python-pytest-xdist
python-scipy
- python-semantic-version
python-setuptools-scm))
(home-page "https://github.com/spacetelescope/stdatamodels";)
(synopsis
@@ -3390,8 +3379,8 @@ implemented in the @acronym{JWST, James Webb Space
Telescope} and
;; See https://github.com/spacetelescope/stpipe/issues/114
#:test-flags #~(list "-k" "not test_roman_datamodel")))
(build-system pyproject-build-system)
- (propagated-inputs (list python-asdf python-astropy python-crds
- python-semantic-version python-stdatamodels))
+ (propagated-inputs
+ (list python-asdf python-astropy python-crds python-stdatamodels))
(native-inputs (list python-pytest python-pytest-doctestplus
python-pytest-openfiles python-setuptools-scm))
(home-page "https://github.com/spacetelescope/stpipe";)
@@ -3429,7 +3418,6 @@ implementing calibration pipeline software.")
(native-inputs (list python-pytest
python-pytest-astropy
python-pytest-astropy-header
- python-semantic-version
python-setuptools-scm))
(home-page "https://github.com/spacetelescope/stsynphot_refactor";)
(synopsis "Synthetic photometry using Astropy for HST and JWST")
@@ -4423,7 +4411,6 @@ object.")
(native-inputs
(list python-pytest
python-pytest-astropy
- python-semantic-version
python-setuptools-scm))
(home-page "https://github.com/spacetelescope/synphot_refactor";)
(synopsis "Synthetic photometry using Astropy")
@@ -4457,7 +4444,6 @@ of the old packages.")
python-pytest
python-pytest-cov
python-scipy
- python-semantic-version
python-setuptools-scm))
(home-page "https://tweakwcs.readthedocs.io/en/latest/";)
(synopsis
@@ -4503,7 +4489,6 @@ between image and reference catalogs. Currently only
aligning images with
python-pytest-doctestplus
python-pytest-remotedata
python-pytest-xdist
- python-semantic-version
python-setuptools-scm))
(propagated-inputs
(list python-asdf-standard
@@ -4513,7 +4498,8 @@ between image and reference catalogs. Currently only
aligning images with
python-jmespath
python-lz4
python-numpy
- python-pyyaml))
+ python-pyyaml
+ python-semantic-version))
(home-page "https://github.com/asdf-format/asdf";)
(synopsis "Python tools to handle ASDF files")
(description
@@ -4549,7 +4535,6 @@ implementation of the ASDF Standard.")
(native-inputs
(list python-numpy
python-pytest
- python-semantic-version
python-setuptools-scm))
(propagated-inputs
(list python-asdf
@@ -4648,7 +4633,6 @@ package such as asdf-astropy.")
(native-inputs
(list python-pytest
python-pytest-xdist
- python-semantic-version
python-setuptools-scm))
(propagated-inputs
(list python-asdf))
@@ -4767,7 +4751,7 @@ install an implementation package such as asdf-astropy.")
(propagated-inputs
(list python-asdf python-fsspec python-zarr))
(native-inputs
- (list python-pytest python-semantic-version python-setuptools-scm))
+ (list python-pytest python-setuptools-scm))
(home-page "https://github.com/asdf-format/asdf-zarr";)
(synopsis "Asdf extension to support Zarr arrays")
(description
@@ -4804,7 +4788,6 @@ specification.")
python-pytest-astropy
python-pytest-xdist
python-scipy
- python-semantic-version
python-setuptools-scm))
(propagated-inputs
(list python-asdf
@@ -4838,7 +4821,6 @@ Astropy objects.")
(list python-asdf
python-pytest
python-pytest-openfiles
- python-semantic-version
python-setuptools-scm))
(propagated-inputs
(list python-asdf-coordinates-schemas
@@ -4869,7 +4851,6 @@ install an implementation package such as gwcs.")
python-pytest
python-pytest-doctestplus
python-pyyaml
- python-semantic-version
python-setuptools-scm))
(propagated-inputs
(list python-asdf
@@ -4907,9 +4888,7 @@ default) to world coordinates.")
;; python-rad -> python-roman-datamodels -> python-crds -> python-rad
#:test-flags #~(list "--ignore=tests/test_schemas.py")))
(native-inputs
- (list python-pytest
- python-semantic-version
- python-setuptools-scm))
+ (list python-pytest python-setuptools-scm))
(propagated-inputs (list python-asdf python-asdf-astropy))
(home-page "https://github.com/spacetelescope/rad";)
(synopsis "Roman Attribute Dictionary")
@@ -5023,7 +5002,6 @@ solar physics.")
python-pytest-doctestplus
python-pytest-env
python-pytest-xdist
- python-semantic-version
python-setuptools-scm))
(home-page "https://github.com/spacetelescope/roman_datamodels";)
(synopsis "Roman Datamodels Support")
@@ -5057,8 +5035,7 @@ pipelines.")
(list python-astropy
python-ccdproc
python-pillow
- python-pytest
- python-semantic-version))
+ python-pytest))
(propagated-inputs
(list python-bottleneck
python-numpy
