Re: bug? also [PATCH] Add snap-aligner.

Thanks Ricardo. On 11/12/15 01:54, Ricardo Wurmus wrote: Ben Woodcroft writes: I tried doing the check for reproducibility $ ./pre-inst-env guix build --rounds=3 snap-aligner but it only built once. $ ./pre-inst-env guix build --check snap-aligner ;;; note: source file /home/ben/git/guix/gnu

Re: Contributor covenant

Mathieu Lirzin writes: >> In commit e15fcdd, I added a ‘CODE-OF-CONDUCT’ file taken from >> , which is essentially a way of >> telling the lurkers out there: yes, we do our best to be welcoming and >> we’re committed to doing so, so join us! The guix-maintain...

Re: python-matplotlib: should it propagate numpy?

On Wed, Dec 9, 2015 at 11:03 PM, Ricardo Wurmus wrote: > > Federico Beffa writes: > >> I just tried out using matplotlib without numpy and it actually works: > > [...] > >> Therefore, despite numpy being the standard data crunching base >> format, I don't think we need to propagate it. > > I cann

Re: Contributor covenant

On Thu, 10 Dec 2015 14:13:28 +0100 Ricardo Wurmus wrote: > Mathieu Lirzin writes: > > [...] > > I did not read the code of conduct as a warranty. It is a declaration > of intent, shows that we as a project are aware of social obstacles in > contributing to free software projects and active

Re: Update mafft to 7.245.

Ben Woodcroft writes: > Two reviews in record time, nice. > > On 10/11/15 23:12, Efraim Flashner wrote: >> On Tue, 10 Nov 2015 22:18:10 +1000 >> Ben Woodcroft wrote: >> >>> Also had to fix the inputs. Hard not to notice these things in the >>> environment container - worked well thanks. >> Do t

Re: bug? also [PATCH] Add snap-aligner.

Ben Woodcroft writes: > I tried doing the check for reproducibility > $ ./pre-inst-env guix build --rounds=3 snap-aligner > but it only built once. > > $ ./pre-inst-env guix build --check snap-aligner > ;;; note: source file /home/ben/git/guix/gnu/packages/bioinformatics.scm > ;;; newer th

Re: [PATCH] Add libconfig.

Ricardo Wurmus writes: > Roel Janssen writes: > >> Sorry about creating yet another file. I looked at filenames to find a >> place to put this in, but I hadn't looked careful enough it seems. I >> think this fits in 'textutils.scm' indeed. The updated version of the >> patch should be better.

Re: [PATCH] Add libconfig.

Roel Janssen writes: > Sorry about creating yet another file. I looked at filenames to find a > place to put this in, but I hadn't looked careful enough it seems. I > think this fits in 'textutils.scm' indeed. The updated version of the > patch should be better. Nice! I amended your commit

Re: [PATCH] Add cereal + sparsehash

Andreas Enge writes: > On Tue, Dec 01, 2015 at 11:44:06AM +0100, Ricardo Wurmus wrote: >> I’d like to do this, but I’m pretty bad at naming things. How about a >> new module “datastructures.scm” where this could comfortably fit in? > > I also did not know a good name, so did not suggest anythin

Re: [PATCH] Add libconfig.

>From 72e065fc7c8012508ee8ac2963ac25a7c173d33f Mon Sep 17 00:00:00 2001 From: Roel Janssen Date: Thu, 10 Dec 2015 16:15:04 +0100 Subject: [PATCH] gnu: Add libconfig. * gnu/packages/textutils.scm (libconfig): New variable. --- gnu/packages/textutils.scm | 22 ++ 1 file changed

Re: [PATCH]: Rewrite CRAN importer.

Ludovic Courtès writes: >> +(define (safe-car maybe-pair) > > Does it have airbags? Rounded corners, no explosive combustion engine, and wrapped in an extra thick layer of fluff! >> + (if (or (null? maybe-pair) >> + (not maybe-pair)) >> + #f >> + (car maybe-pair))) > > Seri

Re: [PATCH] Add libconfig.

Hi Roel, > This is a patch to add libconfig. It's a simple library without any > special dependencies. The reason to add this, is because I'm packaging > other software that depends on libconfig. > > I ran guix lint on it, but I still have a problem with TLS, so I'm not > 100% confident running

Re: swh-plugins-lv2: New variable [WIP, v2]

On 12/06/2015 11:44 PM, Florian Paul Schmidt wrote: > Just pushing this out to get some feedback (I'll need to package more > audio plugins and this might be a good start to talk about possible issues) Updated the patch, since it seems the other version didn't get submitted.. Flo -- https://fp

[PATCH] Add libconfig.

>From a21ebd71a39bf5000e5809514f0e00185311795d Mon Sep 17 00:00:00 2001 From: Roel Janssen Date: Thu, 10 Dec 2015 14:45:47 +0100 Subject: [PATCH] gnu: Add libconfig. * gnu/packages/libconfig.scm: New file. * gnu-system.am (GNU_SYSTEM_MODULES): Add it. --- gnu-system.am | 1 + gnu/p

Re: [PATCH] Add Pandoc (and whatever it needs)

Ludovic Courtès writes: >> +(home-page "https://github.com/haskell-crypto/cryptonite";) >> +(synopsis "Cryptography primitives") >> +(description >> + "This package is a repository of cryptographic primitives for Haskell. >> +It strives to be a cryptographic kitchen sink that pro

Re: [PATCH] Update biopython to 1.66.

Ludovic Courtès writes: >> I also figure with the shiny new updaters it might make things easier >> if pypi is used instead of the biopython site. > > I think so. Is it the same archive that is served on both sites? For > instance, does the pypi version include tests and doc as well? Yes. Th

Re: Contributor covenant

Mathieu Lirzin writes: > The problem is that this code of conduct pretends to give a warranty of > an "harassment-free experience", which is is a slippery slope (Sorry to > not be able to expand more on it in english). IMHO it would be > preferable to revert this commit, and let the necessary d

bug? also [PATCH] Add snap-aligner.

Hey, I tried doing the check for reproducibility $ ./pre-inst-env guix build --rounds=3 snap-aligner but it only built once. $ ./pre-inst-env guix build --check snap-aligner ;;; note: source file /home/ben/git/guix/gnu/packages/bioinformatics.scm ;;; newer than compiled /home/ben/git/guix

Re: Contributor covenant

Le 2015-12-09 18:55, Mathieu Lirzin a écrit : The problem is that this code of conduct pretends to give a warranty of an "harassment-free experience", which is is a slippery slope (Sorry to not be able to expand more on it in english). IMHO it would be preferable to revert this commit, and let

Re: [PATCH] Update biopython to 1.66.

On 10/12/15 19:31, Ricardo Wurmus wrote: Ludovic Courtès writes: From bb6e9ba482ea8602afafd9f6a310a8053544bd80 Mon Sep 17 00:00:00 2001 From: Ben Woodcroft Date: Wed, 11 Nov 2015 21:27:02 +1000 Subject: [PATCH] gnu: python-biopython, python2-biopython: Update to 1.66. * gnu/packages/bioinfo

Re: [PATCH 1/3] emacs: Handle compiled and compressed autoloads.

Ludovic Courtès (2015-12-09 16:58 +0300) wrote: > Alex Kost skribis: > >> Ludovic Courtès (2015-12-08 02:00 +0300) wrote: >>> Otherwise there’s a risk of fooling the GC, as in >>> . >> >> Hm, OK. I don't fully understand the issue though. So *.el files of >> 'emacs-w3

Re: [PATCH] gnu: rxvt-unicode: Add the terminal capability data.

Mathieu Lirzin skribis: > l...@gnu.org (Ludovic Courtès) writes: > >> Mathieu Lirzin skribis: > [...] >>> +(native-search-paths >>> + (list (search-path-specification >>> +(variable "TERMINFO_DIRS") >>> +(files '("share/terminfo") >> >> This should be in the n

Re: [PATCH] Update biopython to 1.66.

Ludovic Courtès writes: >> From bb6e9ba482ea8602afafd9f6a310a8053544bd80 Mon Sep 17 00:00:00 2001 >> From: Ben Woodcroft >> Date: Wed, 11 Nov 2015 21:27:02 +1000 >> Subject: [PATCH] gnu: python-biopython, python2-biopython: Update to 1.66. >> >> * gnu/packages/bioinformatics.scm (python-biopyth

Re: [PATCH, WIP, v2] new variable: redshift

On 11/24/2015 09:28 AM, Florian Paul Schmidt wrote: > How could anyone live without this? I am disappoint.. I couldn't try it > on bare metal yet and the drm and randr methods fail in qemu. Maybe > someone can test it? Thanks? Version 2 of the patch. lint is happy. Some recomended changes included