Re: [PATCH] gnu: Add bedtools

2014-12-16 Thread Ludovic Courtès
es. I hope that's correct. Yes it is. > From 5d1d383417992369e6fa3f81331e87471183ffc6 Mon Sep 17 00:00:00 2001 > From: Ricardo Wurmus > Date: Thu, 11 Dec 2014 17:37:16 +0100 > Subject: [PATCH] gnu: Add bedtools > > * gnu/packages/bioinformatics.scm (bedtools): New variabl

Re: [PATCH] gnu: Add bedtools

2014-12-16 Thread John Darrington
On Tue, Dec 16, 2014 at 11:06:15AM +0100, Ricardo Wurmus wrote: John Darrington writes: > I suggest that in the description and particularly in the synopsis fields you > avoid persiflage like "swiss-army knife". It doesn't add any information, and > only goes to i

Re: [PATCH] gnu: Add bedtools

2014-12-15 Thread Ricardo Wurmus
>From 5d1d383417992369e6fa3f81331e87471183ffc6 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 11 Dec 2014 17:37:16 +0100 Subject: [PATCH] gnu: Add bedtools * gnu/packages/bioinformatics.scm (bedtools): New variable. --- gnu/packages/bioinformatics.scm | 49 + 1 file

Re: [PATCH] gnu: Add bedtools

2014-12-12 Thread Mark H Weaver
Ricardo Wurmus writes: > From c8d71da303ff6b82a30db542d382cab57a00699e Mon Sep 17 00:00:00 2001 > From: Ricardo Wurmus > Date: Thu, 11 Dec 2014 17:37:16 +0100 > Subject: [PATCH] gnu: Add bedtools Ludovic mostly covered this, but I have two additional suggestions: > +

Re: [PATCH] gnu: Add bedtools

2014-12-12 Thread Ludovic Courtès
Ricardo Wurmus skribis: > Since there is no install phase in the Makefile I had to write a > replacement to copy all tools from the build bin/ directory to the > output /bin/ directory. I don't know if it is better to explicitly list > the tools to copy or if this should rather be done with a gl

[PATCH] gnu: Add bedtools

2014-12-12 Thread Ricardo Wurmus
:37:16 +0100 Subject: [PATCH] gnu: Add bedtools * gnu/packages/bioinformatics.scm (bedtools): New variable. --- gnu/packages/bioinformatics.scm | 68 + 1 file changed, 68 insertions(+) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatic