Re: [PATCHES] Add vsearch.

2015-10-03 Thread Andreas Enge
On Sat, Oct 03, 2015 at 11:59:33AM +1000, Ben Woodcroft wrote: > I think you are right, I have attached the patch. Thanks, I just pushed it. Andreas

Re: [PATCHES] Add vsearch.

2015-10-03 Thread Ludovic Courtès
Ben Woodcroft skribis: > I also noticed that the license definition was changed from the first > patch applied, removing the public-domain license i.e. from > > +(license (list license:gpl3 license:bsd-2 license:public-domain > > to > > +(license (list

Re: [PATCHES] Add vsearch.

2015-10-02 Thread Ricardo Wurmus
Andreas Enge writes: > my impression is that quite a few of the packages from scientific computing > and bioinformatics fail to build on non-x86 architectures, and maybe even on > i686. Presumably, there is not much interest in running such specialised code > on less performing

Re: [PATCHES] Add vsearch.

2015-10-02 Thread Andreas Enge
Hi Ricardo, On Fri, Oct 02, 2015 at 01:40:07PM +0200, Ricardo Wurmus wrote: > On the other hand we have many more packages that cannot currently be > built because they depend on libraries or applications that fail on > i686, mips or arm. I’m hoping to look at the icedtea and openblas > failures

Re: [PATCHES] Add vsearch.

2015-10-02 Thread Ben Woodcroft
On 02/10/15 00:05, Ludovic Courtès wrote: Vsearch fails to build on platforms other than x86_64 (see ): --8<---cut here---start->8--- In file included from

Re: [PATCHES] Add vsearch.

2015-10-01 Thread Ludovic Courtès
Ben Woodcroft skribis: > From e1789cbcfcf7dc6f1657f53bad04fca7180400cc Mon Sep 17 00:00:00 2001 > From: Ben Woodcroft > Date: Tue, 29 Sep 2015 22:10:33 +1000 > Subject: [PATCH 1/2] gnu: Add cityhash. > > * gnu/packages/textutils.scm (cityhash): New

Re: [PATCHES] Add vsearch.

2015-10-01 Thread Ludovic Courtès
Vsearch fails to build on platforms other than x86_64 (see ): --8<---cut here---start->8--- In file included from

Re: [PATCHES] Add vsearch.

2015-10-01 Thread Andreas Enge
Hello, my impression is that quite a few of the packages from scientific computing and bioinformatics fail to build on non-x86 architectures, and maybe even on i686. Presumably, there is not much interest in running such specialised code on less performing hardware. It would be good if someone

[PATCHES] Add vsearch.

2015-09-30 Thread Ben Woodcroft
Apologies if this is a duplicate email. Excellent to see an open source competitor to usearch. Thanks in advance for review as usual. I'm not especially adept at using gcc's flags so perhaps some attention is warranted in the second patch's snippet. >From

Re: [PATCHES] Add vsearch.

2015-09-30 Thread Ben Woodcroft
Updated patchset for vsearch 1.4.1 released today. ben On 29/09/15 22:24, Ben Woodcroft wrote: Excellent to see an open source competitor to usearch. Thanks in advance for review as usual. I'm not especially adept at using gcc's flags so perhaps some attention is warranted in the second