Re: [HCP-Users] mris_mask_surfaces missing shared library

2014-10-23 Thread Timothy B. Brown
Hi Joe, The mris_make_surfaces binary in the HCP custom version of FreeSurfer (5.3.0-HCP) was linked using shared libraries. (My understanding is that the mris_make_surfaces binary in other releases of FreeSurfer is linked to static libraries so that the library code is included in the resulting

Re: [HCP-Users] Metric gradient giving only zeros

2014-10-23 Thread Timothy Coalson
The gradient command does not regress out anything, no. I am still curious as to what combination of things caused you to get an output of zeros, rather than an error message, it might be something we should debug (errors are more helpful than wrong output). You can reply to me directly if you pr

[HCP-Users] mris_mask_surfaces missing shared library

2014-10-23 Thread Joseph Orr
Hi, I’m getting the below missing shared libraries error from mris_make_surfaces with Freesurfer-5.3.0-HCP. Is it possible that I am missing a required package/ file? I was able to run FreeSurferPipeline.sh without error using the release version of FS-5.3.0. What are the impacts on my results u

[HCP-Users] data for recognition memory task

2014-10-23 Thread Torsten Ruest
Hi HCP team, I have a question related to the recognition memory task - the ex-scanner follow up to the working memory task. It says in the Barch et al 2013 paper that the data will be presented in a future publication. I couldn't find it so I was wondering if it's out already? Thank you!