Re: [HCP-Users] Functional connectivity gradient map

2017-08-18 Thread Glasser, Matthew
wb_command -cifti-gradient and wb_command -cifti-correlation-gradient. There are also -metric-gradient for GIFTI files and -volume-gradient for NIFTI files. Peace, Matt. From: > on behalf of Sang-Yun Oh

[HCP-Users] Functional connectivity gradient map

2017-08-18 Thread Sang-Yun Oh
Dear HCP users, In this paper, https://www.nature.com/nature/journal/v536/n7615/fig_tab/nature18933_F2.html, I imagine Figure 2g is a row in the dense connectome. How were Figure 2, c and d generated? Is there code available to compute the FC gradients? I searched the github, but nothing caught

Re: [HCP-Users] Gifti surface labels

2017-08-18 Thread Claude Bajada
Great, thanks! Claude On 18.08.2017 16:08, Glasser, Matthew wrote: > For the 32k 2mm average spacing surfaces you can find the standard medial > wall definitions here: > > https://github.com/Washington-University/Pipelines/blob/master/global/templ >

Re: [HCP-Users] Gifti surface labels

2017-08-18 Thread Glasser, Matthew
For the 32k 2mm average spacing surfaces you can find the standard medial wall definitions here: https://github.com/Washington-University/Pipelines/blob/master/global/templ ates/91282_Greyordinates/L.atlasroi.32k_fs_LR.shape.gii

[HCP-Users] Gifti surface labels

2017-08-18 Thread Claude Bajada
Hi all, I had asked a question on this forum a while ago related to medial wall structures in cifti and gifti files and I have a follow-up question. I have been going through the gifti file format and have learned that the medial wall structures are labeled as ??? Unfortunately, it seems that