Re: [HCP-Users] Adjusting EV timing text files in EMO task

Hi Michelle, Greg may want to add more, but I think what you are seeing is related to the bug in the Emotion task as described on p54 of the S1200 Release Manual: Note: A bug was writt

[HCP-Users] Adjusting EV timing text files in EMO task

Hello all, I'm a little confused as to whether the timings in the EVs folder (fear/neutral.txt) need adjusting? The GLM model .png output for the EMO task (attached below) seems to have no padding at the end of the run. Any clarification would be much appreciated, thank you!! -Michelle

Re: [HCP-Users] MP2RAGE

I haven’t tried this before. Matt. From: Danny Kim mailto:d...@bcchr.ca>> Date: Tuesday, May 1, 2018 at 3:32 PM To: Matt Glasser mailto:glass...@wustl.edu>>, "hcp-users@humanconnectome.org" mailto:hcp-users@humanconnectome.org>> Subject: Re: [HCP-Users] MP2

Re: [HCP-Users] MP2RAGE

Hi Matt This is 3T data. Danny From: Glasser, Matthew Sent: Tuesday, May 1, 2018 1:25 PM To: Danny Kim; hcp-users@humanconnectome.org Subject: Re: [HCP-Users] MP2RAGE Is this 3T n or 7T data? Matt. From: mailto:hcp-users-boun...@humanconnectome.org>> on

Re: [HCP-Users] MP2RAGE

Is this 3T n or 7T data? Matt. From: mailto:hcp-users-boun...@humanconnectome.org>> on behalf of Danny Kim mailto:d...@bcchr.ca>> Date: Tuesday, May 1, 2018 at 3:08 PM To: "hcp-users@humanconnectome.org" mailto:hcp-users@humanconnectome.org>> Subject: [HC

[HCP-Users] MP2RAGE

Hi experts, I was wondering if anyone has experience with getting MP2RAGE data through the structural HCP pipeline? I'm specifically looking for some help in streamlining brain extraction, negating non-intensity uniform correction, and correctly obtaining myelin maps on surfaces. Currently

Re: [HCP-Users] CARIT Psyexp files

Thank you for your response - I'll check into the possibility of hiding the RA displays, particularly if Erik has any guidance about that. I was able to download the task files from the website but the .psyexp files are not part of the downloaded files (just the .py code and associated files for r

Re: [HCP-Users] CARIT Psyexp files

The scripts are currently available for download at: https://www.humanconnectome.org/study/hcp-lifespan-aging/project-protocol/task-protocols-hcp-aging https://www.humanconnectome.org/study/hcp-lifespan-development/project-protocol/task-protocols-hcp-development Currently, there is not a single-sc

Re: [HCP-Users] Problems viewing volumes using workbench in Linux

The first issue is currently resolved in the development version of Workbench, but a related issue is not. We will try to get that fixed too before the next release. Matt. From: mailto:hcp-users-boun...@humanconnectome.org>> on behalf of Matt Glasser mailto:glass...@wustl.edu>> Date: Tuesday

Re: [HCP-Users] Problems viewing volumes using workbench in Linux

Can you send me the file? Matt. From: Emma Robinson mailto:emma.robinso...@gmail.com>> Date: Tuesday, May 1, 2018 at 11:06 AM To: Matt Glasser mailto:glass...@wustl.edu>> Cc: "hcp-users@humanconnectome.org" mailto:hcp-users@humanconnectome.org>> Subject: Re

Re: [HCP-Users] Problems viewing volumes using workbench in Linux

Hi Matt Both are running version is 1.2.3, which seems to be the most up-to-date? Thanks Emma On 1 May 2018 at 14:29, Glasser, Matthew wrote: > Hi Emma, > > Are these the same workbench version? I think we fixed this issue at some > point along the way. > > Matt. > > From: on behalf of Em

[HCP-Users] CARIT Psyexp files

Hi all, I am writing with a couple of questions about the CARIT task that is being used in the HCP Development and Aging projects. I am hoping to use the CARIT to implement the regular Go/Nogo task (without the reward aspect) in a VA-funded project involving PTSD treatment (scanning will be done a

[HCP-Users] *CORRECTED* Call for Submissions: Conference Posters & Austen Riggs Scholars in Computational Psychiatry & Representation

Dear Colleague, The Austen Riggs Center is currently accepting submissions for its 2018 Erikson Institute Fall Conference, "Duality's End: Computational Psychiatry and The Cognitive Science of Representation" (Sept 28-30 at The Kripalu Center for Yoga and Health in Stockbridge, MA). Candidates

Re: [HCP-Users] Problems viewing volumes using workbench in Linux

Hi Emma, Are these the same workbench version? I think we fixed this issue at some point along the way. Matt. From: mailto:hcp-users-boun...@humanconnectome.org>> on behalf of Emma Robinson mailto:emma.robinso...@gmail.com>> Date: Tuesday, May 1, 2018 at 7:00 AM To: "hcp-users@humanconnecto