Hi,
I would like to use this new MSMall atlas. For that I need to open it in a
toolbox or matlab, however I am not able to open it using either
freesurfer, caret, FSlviwer, fieldtrip, only through the workbench.
So lets say I want to load this nii file in matlab using freesurfer
MRIread:
/BALSA
--
>> Conte Center for the Neuroscience of Mental Disorders
>> Washington University School of Medicine
>> Department of Psychiatry, Box 8134
>> 660 South Euclid Ave. Tel: 314-747-6173
>> St. Louis, MO 63110 Email: mha...@wus
Hi
Meanwhile, you can take a look at this method:
https://figshare.com/articles/HCP-MMP1_0_projected_on_fsaverage/3498446
The fsaverage atlas can be then projected to individual space with
surf2surf command.
Cheers,
Adonay
On Thu, Aug 18, 2016 at 3:01 PM, Glasser, Matthew wrote:
> We’ve been
HI
HCP MEG dataset provides surfaces with 4k vertices, I would like to
resample it to 2k. I have tried wd_command -cifti-resample, but it requires
a cifti-template, but i don't have any cifti of 2k.
What commands should I use to get a 2k surface for every subject?
Thanks
__
Wednesday, May 24, 2017 at 9:57 PM
>
> To: Matt Glasser
> Cc: Timothy Coalson , A Nunes ,
> "hcp-users@humanconnectome.org"
> Subject: Re: [HCP-Users] create 2k space
>
> Oh interesting. Now I can't remember if I found that version and used it
> as a start
Hi,
The MEG resting state data is split in three sessions, is it possible to
append the data before computing the covariance matrix?
I have some doubts because the sensor position might change between the
recordings and if ICA was done separately, then the rank would change
between sessions and I
n
> to this virtual MEG sensors using Fieltrip’s function ft_megrealign and
> then combine all data in this virtual sensor space. Keep in mind that this
> projects the data into source space and projects it back to the virtual
> sensor space.
>
> I hope this helps
> Best
> Giorg
o
>
>
>
> *Da:* hcp-users-boun...@humanconnectome.org [mailto:hcp-users-bounces@
> humanconnectome.org ] *Per conto
> di *Michalareas, Georgios
> *Inviato:* venerdì 17 novembre 2017 14:15
> *A:* A Nunes ;
> HCP-Users@humanconnectome.org
> *Oggetto:* Re: [HCP-Users] MEG
Hi
I want to create a .dlabel from a .dscalar in which I have a label value
for every vertex. I want to use:
wb_command -metric-label-import
- the input metric file
- text file containing the values and names for
labels
output file
However, I don't have a label-list-file.
I
Hi HCP community,
I have some parcellations done in matlab, so for every vertex I have a
cluster number label. I usually save it as a pscalar with the Fieldtrip
function ft_write_cifti, then I convert it into a .label file.
It works fine, however, I would like to not save one pscalar at a time bu
at 1:48 PM, Timothy Coalson wrote:
> You can set map names on data files with wb_command -set-map-names.
> However, as Matt says, we would rather support the ciftiread/ciftiwrite
> functions for fMRI data.
>
> Tim
>
>
> On Mon, Dec 18, 2017 at 2:56 PM, A Nunes wrot
Hi
I just found it in the FAQ:
https://wiki.humanconnectome.org/display/PublicData/HCP+Users+FAQ
Thanks!
Adonay
On Mon, Dec 18, 2017 at 2:26 PM, A Nunes wrote:
> Hi
>
> Thanks for your answers, however I can not find the
> scripts ciftiread/ciftiwrite/ciftiwritereset, the only m
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