hemisphere to create the random
parcellation volume.
9. Overlay the random parcellation volume on the template volume.
See attached screenshot.jpeg showing the misalignment between the random
parcellation volume and the template volume.
Kind regards,
Simon Baker
Brain & Mental Health Labora
details for FreeSurfer.
>
> Peace,
>
> Matt.
>
> From: Simon Baker
> Date: Tuesday, November 10, 2015 at 11:34 PM
> To: "hcp-users@humanconnectome.org"
> Cc: "Harms, Michael" , Timothy Coalson ,
> Matt Glasser
>
> Subject: Re: [HCP-Users]
> Department of Anatomy and Neurobiology, Box 8108
> 660 South Euclid Avenue
> St. Louis, MO 63110
> 314-362-9387
> el...@pcg.wustl.edu
> www.humanconnectome.org
>
>
>
> *From:* hcp-users-boun...@humanconnectome.org [mailto:
> hcp-users-boun...@humanconnectome.org
ine
> Department of Anatomy and Neurobiology, Box 8108
> 660 South Euclid Avenue
> St. Louis, MO 63110
> 314-362-9387
> el...@pcg.wustl.edu
> www.humanconnectome.org
>
>
>
> *From:* Simon Baker [mailto:simonteba...@gmail.com]
> *Sent:* Wednesday, December 16, 201
left hemisphere region and a right hemisphere region.
Using wb_command, how can we generate a NIFTI volume file containing both
the left hemisphere parcellation and the right hemisphere parcellation and
ensure that each voxel is labelled as only one region?
Kind regards,
Simon Baker
Brain
ustom.txt >
>> ${Subject}.custom.txt
>> wb_command -volume-label-import ${Subject}.custom_raw.nii.gz ${Subject}
>> .custom.txt ${Subject}.custom.nii.gz
>>
>> I also suggest using .nii.gz, label files compress very well. Unlike
>> FSL, workbench doesn't
Hi Tim,
Have you had a chance to look into this issue?
Thanks,
Simon
On 18 October 2016 at 15:15, Simon Baker wrote:
> Hi Tim,
>
> Using FreeView, I loaded HCP subject 101410's MNINonLinear/T1w_restore_brain,
> MNINonLinear/aparc+aseg, and MNINonLinear/aparc.a2009s+aseg v
