Re: [HCP-Users] geodesic-distance

2016-05-31 Thread Timothy Coalson
ve something for on the surface. Maybe check > FreeSurfer. > > Peace, > > Matt. > > From: on behalf of Matt Glasser < > glass...@wustl.edu> > Date: Sunday, May 29, 2016 at 6:13 PM > To: Marta Moreno > > Cc: HCP Users > Subject: Re: [HCP-Users] geodesic

Re: [HCP-Users] geodesic-distance

2016-05-29 Thread Glasser, Matthew
oud.com>> Cc: HCP Users mailto:hcp-users@humanconnectome.org>> Subject: Re: [HCP-Users] geodesic-distance fslstats -c or -C Peace, Matt. From: Marta Moreno mailto:mmorenoort...@icloud.com>> Date: Sunday, May 29, 2016 at 6:11 PM To: Matt Glasser mailto:glass...@wustl.edu>

Re: [HCP-Users] geodesic-distance

2016-05-29 Thread Glasser, Matthew
fslstats -c or -C Peace, Matt. From: Marta Moreno mailto:mmorenoort...@icloud.com>> Date: Sunday, May 29, 2016 at 6:11 PM To: Matt Glasser mailto:glass...@wustl.edu>> Cc: HCP Users mailto:hcp-users@humanconnectome.org>> Subject: Re: [HCP-Users] geodesic-distance I though

Re: [HCP-Users] geodesic-distance

2016-05-29 Thread Marta Moreno
eace, > > Matt. > > From: Marta Moreno <mailto:mmorenoort...@icloud.com>> > Date: Sunday, May 29, 2016 at 6:04 PM > To: Matt Glasser mailto:glass...@wustl.edu>> > Cc: HCP Users <mailto:hcp-users@humanconnectome.org>> > Subject: Re: [HCP-Users] geodesi

Re: [HCP-Users] geodesic-distance

2016-05-29 Thread Glasser, Matthew
Are the coordinates near the surface? Peace, Matt. From: Marta Moreno mailto:mmorenoort...@icloud.com>> Date: Sunday, May 29, 2016 at 6:07 PM To: Matt Glasser mailto:glass...@wustl.edu>> Cc: HCP Users mailto:hcp-users@humanconnectome.org>> Subject: Re: [HCP-Users] geodesic

Re: [HCP-Users] geodesic-distance

2016-05-29 Thread Marta Moreno
l.edu>> > Cc: HCP Users <mailto:hcp-users@humanconnectome.org>> > Subject: Re: [HCP-Users] geodesic-distance > > ?44, 40, 29 > > *** > Leah Moreno, Ph.D. > Postdoctoral Research Fellow > Division of Experimental Therapeutics > New Yo

Re: [HCP-Users] geodesic-distance

2016-05-29 Thread Glasser, Matthew
Try without the commas. Peace, Matt. From: Marta Moreno mailto:mmorenoort...@icloud.com>> Date: Sunday, May 29, 2016 at 6:04 PM To: Matt Glasser mailto:glass...@wustl.edu>> Cc: HCP Users mailto:hcp-users@humanconnectome.org>> Subject: Re: [HCP-Users] geodesic-dis

Re: [HCP-Users] geodesic-distance

2016-05-29 Thread Marta Moreno
l.edu>> > Cc: HCP Users <mailto:hcp-users@humanconnectome.org>> > Subject: Re: [HCP-Users] geodesic-distance > > Thanks for answering! > No error message but vertex-list-out is empty > > *** > Leah Moreno, Ph.D. > Postdoctoral Research F

Re: [HCP-Users] geodesic-distance

2016-05-29 Thread Glasser, Matthew
How did you format your coordinates.txt file? Peace, Matt. From: Marta Moreno mailto:mmorenoort...@icloud.com>> Date: Sunday, May 29, 2016 at 6:00 PM To: Matt Glasser mailto:glass...@wustl.edu>> Subject: Re: [HCP-Users] geodesic-distance wb_command -surface-closest-vertex /V

Re: [HCP-Users] geodesic-distance

2016-05-29 Thread Glasser, Matthew
How did you call the command? Peace, Matt. From: Marta Moreno mailto:mmorenoort...@icloud.com>> Date: Sunday, May 29, 2016 at 5:58 PM To: Matt Glasser mailto:glass...@wustl.edu>> Cc: HCP Users mailto:hcp-users@humanconnectome.org>> Subject: Re: [HCP-Users] geodesic-di

Re: [HCP-Users] geodesic-distance

2016-05-29 Thread Marta Moreno
orenoort...@icloud.com>> > Date: Sunday, May 29, 2016 at 5:54 PM > To: HCP Users <mailto:hcp-users@humanconnectome.org>> > Subject: [HCP-Users] geodesic-distance > > Dear users, > > I want to compute the geodesic distance in mm between two vertices using MNI

Re: [HCP-Users] geodesic-distance

2016-05-29 Thread Glasser, Matthew
What is the error message? Peace, Matt. From: mailto:hcp-users-boun...@humanconnectome.org>> on behalf of Marta Moreno mailto:mmorenoort...@icloud.com>> Date: Sunday, May 29, 2016 at 5:54 PM To: HCP Users mailto:hcp-users@humanconnectome.org>> Subject: [HCP-Users] geode

[HCP-Users] geodesic-distance

2016-05-29 Thread Marta Moreno
Dear users, I want to compute the geodesic distance in mm between two vertices using MNI coordinates as input. I was planing to do: wb_command -surface-closest-vertex wb_commands -surface-geodesic-distance But the first command is not working. What am I doing wrong? Also, is there any other way