[HCP-Users] problem with FreeSurfer2CaretConvertAndRegisterNonlinear

2017-11-02 Thread Mara Cercignani
Dear HCP-users list I am new to the HCP pipeline and I'm experiencing a problem while running PostFreeSurferPipelineBatch.s on Mac-Os. I get the following error message: While running: /Applications/workbench/bin_macosx64/../macosx64_apps/wb_command.app/Contents/MacOS/wb_command -surface-dis

Re: [HCP-Users] problem with FreeSurfer2CaretConvertAndRegisterNonlinear

2017-11-02 Thread Niels Bergsland
Hi Mara, Tim posted about this about a month ago or so. I'm copying/pasting his response for your reference: That is a new option that is not yet in a released version of workbench, and was probably not intended to be pushed to the pipelines repository. You can use github to find the version be

Re: [HCP-Users] problem with FreeSurfer2CaretConvertAndRegisterNonlinear

2017-11-02 Thread Glasser, Matthew
...@humanconnectome.org>> on behalf of Mara Cercignani mailto:m.cercign...@bsms.ac.uk>> Date: Thursday, November 2, 2017 at 4:45 AM To: "hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>" mailto:hcp-users@humanconnectome.org>>

Re: [HCP-Users] problem with FreeSurfer2CaretConvertAndRegisterNonlinear

2017-11-03 Thread Mara Cercignani
From: > on behalf of Mara Cercignani > Date: Thursday, November 2, 2017 at 4:45 AM To: "hcp-users@humanconnectome.org" > Subject: [HCP-Users] problem with FreeSurfer2CaretConvertAndRegisterNonlinear Dear HCP-users list I am new to the HCP pipeline and I'm experie