RE: [Histonet] Regarding a problem in manual paraffin embedding

2013-01-02 Thread Anatoli Gleiberman
Chirayu, Usual problems with heads of late mouse embryos is poor dehydrations. My recommendation is to use isopropanol instead of absolute ethanol. My protocol that worked very well for many years was: Fixation with NBF for 4-6h, short rinse with PBS and storage at 70% ethanol overnight (Alter

Re: [Histonet] Regarding a problem in manual paraffin embedding

2013-01-02 Thread Rene J Buesa
Chirayu: I think there are several issues in your protocol: 1- the fixation time looks well but when you wash the fixed specimen overnight with running water you "unfix" the tissue because formalin fixation is totally reversible. You end with an unfixed tissue. After fixation do not wash the fix

RE: [Histonet] Regarding a problem in manual paraffin embedding

2013-01-02 Thread Rittman, Barry R
Chirayu a happy new year to you. I am guessing that there could be 3 possible problems. 1. It appears that the xylene is not changed - maybe the xylene should have more than one change to eliminate all the alcohol. 2. The alcohol you are using as 100% may have some traces of water in it. 3. Th

Re: [Histonet] Regarding a problem in manual paraffin embedding

2013-01-01 Thread Massimo
Hi, I think that your problem is not an enough infiltration time into Xylene but It is a not complete  dehydration of the specimen quite thick. When it happens I come back to new absolute ethanol and then again into Xylene up to complete clearification. I process small pieces so my scheduled t