[ https://issues.apache.org/jira/browse/SPARK-17210?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Felix Cheung resolved SPARK-17210. ---------------------------------- Resolution: Fixed Assignee: Jeff Zhang Fix Version/s: 2.1.0 2.0.1 Target Version/s: 2.0.1, 2.1.0 > sparkr.zip is not distributed to executors when run sparkr in RStudio > --------------------------------------------------------------------- > > Key: SPARK-17210 > URL: https://issues.apache.org/jira/browse/SPARK-17210 > Project: Spark > Issue Type: Bug > Components: SparkR > Affects Versions: 2.0.0 > Reporter: Jeff Zhang > Assignee: Jeff Zhang > Fix For: 2.0.1, 2.1.0 > > > Here's the code to reproduce this issue. > {code} > Sys.setenv(SPARK_HOME="/Users/jzhang/github/spark") > .libPaths(c(file.path(Sys.getenv(), "R", "lib"), .libPaths())) > library(SparkR) > sparkR.session(master="yarn-client", sparkConfig = > list(spark.executor.instances="1")) > df <- as.DataFrame(mtcars) > head(df) > {code} > And this is the exception in executor log. > {noformat} > 16/08/24 15:33:45 INFO BufferedStreamThread: Fatal error: cannot open file > '/Users/jzhang/Temp/hadoop_tmp/nm-local-dir/usercache/jzhang/appcache/application_1471846125517_0022/container_1471846125517_0022_01_000002/sparkr/SparkR/worker/daemon.R': > No such file or directory > 16/08/24 15:33:55 ERROR Executor: Exception in task 0.0 in stage 3.0 (TID 6) > java.net.SocketTimeoutException: Accept timed out > at java.net.PlainSocketImpl.socketAccept(Native Method) > at > java.net.AbstractPlainSocketImpl.accept(AbstractPlainSocketImpl.java:404) > at java.net.ServerSocket.implAccept(ServerSocket.java:545) > at java.net.ServerSocket.accept(ServerSocket.java:513) > at org.apache.spark.api.r.RRunner$.createRWorker(RRunner.scala:367) > at org.apache.spark.api.r.RRunner.compute(RRunner.scala:69) > at org.apache.spark.api.r.BaseRRDD.compute(RRDD.scala:49) > at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:319) > at org.apache.spark.rdd.RDD.iterator(RDD.scala:283) > at > org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38) > at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:319) > at org.apache.spark.rdd.RDD.iterator(RDD.scala:283) > at > org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38) > at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:319) > at org.apache.spark.rdd.RDD.iterator(RDD.scala:283) > at > org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38) > at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:319) > at org.apache.spark.rdd.RDD.iterator(RDD.scala:283) > at > org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38) > at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:319) > at org.apache.spark.rdd.RDD.iterator(RDD.scala:283) > at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:70) > at org.apache.spark.scheduler.Task.run(Task.scala:86) > at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:274) > at > java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) > at > java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) > at java.lang.Thread.run(Thread.java:745) > {noformat} -- This message was sent by Atlassian JIRA (v6.3.4#6332) --------------------------------------------------------------------- To unsubscribe, e-mail: issues-unsubscr...@spark.apache.org For additional commands, e-mail: issues-h...@spark.apache.org