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I'm seeing similar behavior to Sankar. Clearing the workspace seems to fix things temporarily, but eventually it returns.
I don't have a solid repro, but this might have to do with the logic in GitSCM.java that excludes some changelog data in computeChangeLog()
Build lastRevWas = getBuildChooser().prevBuildForChangelog(b.getName(), previousBuildData, git, context);
if (lastRevWas != null && git.isCommitInRepo(lastRevWas.getSHA1())) { changelog.excludes(lastRevWas.getSHA1()); exclusion = true; }