Re: [Jmol-developers] ABINIT files problem

2003-02-03 Thread Miguel
Fabian, Yes, I just saw this too. I believe I understand the problem and am about to check in a fix. Miguel > Hi, > > I get this exception upon loading abinit files > > java.lang.NullPointerException > at org.openscience.jmol.Atom.getScreenX(Atom.java:346) > at org.openscience.jm

[Jmol-developers] ABINIT files problem

2003-02-03 Thread Fabian Dortu
Hi, I get this exception upon loading abinit files java.lang.NullPointerException at org.openscience.jmol.Atom.getScreenX(Atom.java:346) at org.openscience.jmol.Atom.toString(Atom.java:397) at org.openscience.cdk.tools.AtomTypeFactory.configure(AtomTypeFactory.java:168) at org

[Jmol-developers] jmol applet - file not found

2003-02-03 Thread Miguel
Thanks for taking the time to submit this bug report. We are currently working on the applet code, with a goal of releasing a new version of Jmol within the next few weeks. I strongly suspect that this problem is related to the use of some libraries which were not compiled with the right flags.

[Jmol-developers] [ jmol-Bugs-679643 ] applet : file not found exception : CDOInterface

2003-02-03 Thread SourceForge.net
Bugs item #679643, was opened at 2003-02-03 08:48 You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=379133&aid=679643&group_id=23629 Category: None Group: None Status: Open Resolution: None Priority: 5 Submitted By: Nobody/Anonymous (nobody) Assigned to: Nobody/Anonym

Re: [Jmol-developers] cdk & applet questions

2003-02-03 Thread Egon Willighagen
> I sent these to you on the cdk chat channel, but in case you don't see > them, I thought I would send an email. > > - included gnujaxp.jar in JmolApplet.jar > - works fine with appletviewer 1.1.6 > - does not work with IE > > The problem is cdk/LoggingTool. It is referring to > org.apache.

[Jmol-developers] cdk & applet questions

2003-02-03 Thread Miguel
Egon, I sent these to you on the cdk chat channel, but in case you don't see them, I thought I would send an email. - included gnujaxp.jar in JmolApplet.jar - works fine with appletviewer 1.1.6 - does not work with IE The problem is cdk/LoggingTool. It is referring to org.apache.log4j.Categ

Re: [Jmol-developers] build.xml & .jar changes

2003-02-03 Thread egonw
Quoting Miguel <[EMAIL PROTECTED]>: > I have not taken a look, but you are probably right. > Someone posted a message a few weeks ago complaining about the shell that > is used in the jmol shell script. I remember that this was a problem for > me too. But I have gotten used to saying: > bash jmol