[Jmol-users] Re: HETATM with large atom sequence number

2004-03-13 Thread Miguel Howard
Jaim wrote: > You might be right in that the problem was related to a particular > version of Jmol. > > Now I'm using 10pre6 and it's able to display with no problems > the hetgroup 2BM that has the described problem: Very good. Miguel ---

Re: [Jmol-users] Chain Colors

2004-03-13 Thread Eric Martz
At 3/12/04, Jan Reichert wrote: Eric Martz schrieb: At 3/12/04, Jan Reichert wrote: I would suggest to avoid both, white and black in color schemes, because I like to use background white for presentation and printing. Regards, Jan "White" as a backbone trace is actually quite visible on a whi

Re: [Jmol-users] open Gaussian output file with Jmol

2004-03-13 Thread Egon Willighagen
On Friday 12 March 2004 17:29, Miguel Howard wrote: > Egon is not around to help ... perhaps someone else can ... > > > I am a new user of Jmol. I just want to know what output file of > > Gaussian Jmol can open? I tried *.log, *.chk and *.com. But I can't open > > them > > Anyone of you can help m

[Jmol-users] HETATM with large atom sequence number

2004-03-13 Thread Miguel Howard
Jaim wrote: > I think that Jmol fails interpreting PDB files when there's no space > between the label (HETATM) and the value (17519), as in these lines from > 1FZ9: > > HETATM17519 C1 ETI 9001 61.663 49.780 58.929 0.60 40.01 > HETATM17520 C2 ETI 9001 60.395 49.983 58.173 0.60

[Jmol-users] Re: Wildcard behavior

2004-03-13 Thread Miguel Howard
But even select [C]3:A.O5* is not working at the moment http://www.imb-jena.de/cgi-bin/SCOPlnk.exe?JMOL=264d in current RasMol select [C]3:A.O5* select C3:A.O5* select C3A.O5* all select the same expected atom. I just checked in code to correct this. All of