I'm in dialog with RCSB on this and will get back to folks when I've
gotten more information.
Bob
Egon Willighagen wrote:
On Monday 17 April 2006 11:20, Jaime Prilusky wrote:
According to Eric Martz:
Several errors in PDB files were reported to RCSB recently. Often their
response is
Right, in the final stages we tightened up the syntax. Two things:
1) use
hbonds calculate
2) The connect sequence of parameters must be in this order:
connect [minimum and maximum distances] [source and target atom sets] [bond type] [modify/create option]
Although "connect (*) (*) hbonds
I'm Victor M. Rosas-Garcia, a Jmol user. My URL is:
http://www.geocities.com/quimico69/
Lat: 25.6667, Long: -100.3167
Please add another marker to the Jmol map.
Have a nice day!
--- [EMAIL PROTECTED] wrote:
>
> Message: 5
> From: Egon Willighagen <[EMAIL PROTECTED]>
> To: jmol-users@list
http://www.stolaf.edu/people/hansonr/longlat.htm
N44 27 39.3768
W93 11 6.702
or
http://maps.google.com/maps?ll=
N 44.460938
E -93.185195
http://maps.google.com/maps?ll=44.4609386,-93.1851950001
Angel Herraez wrote:
Thanks, Egon. Nice touch!
On 17 Apr 2006 at 19:51, Egon Willi
Thanks, Egon. Nice touch!
On 17 Apr 2006 at 19:51, Egon Willighagen wrote:
> http://jmol.sourceforge.net/maps/people/
>
> If you would like to be added to this map, please send your name, URL
> (e.g. you page in the Jmol wiki [1]) and longtitude and latitude, with
> four digits, like 50.056
Nicolas Vervelle wrote:
>
>
> Brian Salter-Duke wrote:
>> On Mon, Apr 17, 2006 at 02:43:49PM -0400, Jules Moskowitz wrote:
>>
>>> I have been able to use jmol-10.00.45 as both and applet with a
>>> browser and as an application to look at some molecules from
>>> terminal (imacg5, OS 10.4).
>>>
Brian Salter-Duke wrote:
On Mon, Apr 17, 2006 at 02:43:49PM -0400, Jules Moskowitz wrote:
I have been able to use jmol-10.00.45 as both and applet with a
browser and as an application to look at some molecules from terminal
(imacg5, OS 10.4).
I have been able to use jmol-10.2.0 with the
Ola Spjuth wrote:
Nico,
That sounds like an excellent feature for Bioclipse using CDK
functionality. Let me know if you are interested in writing up the hack,
and me and Egon can help you get started.
Cheers,
.../Ola
Why using CDK and not directly Jmol features ?
Jmol should now be a
Hi Bob,
Nice initiative.
I don't have the definite file yet (think about ring detection
techniques during your sabbatical ;<) ), just a few additions:
define ~nitroN nitrogen and connected(3) and connected(2,~sp2O)
define ~nitroO ~sp2O and connected(~nitroN)
define ~nitro ~nitroN or ~nitroO
def
If you would like to be added to this map, please send your name, URL
(e.g.
you page in the Jmol wiki [1]) and longtitude and latitude, with four
digits,
like 50.0563, to this mailing list.
52.0769 0.1880
http://www.efamily.org.uk/software/dasclients/spice/
Cheers,
Andreas
-
El 17/04/2006, a las 19:51, Egon Willighagen escribió:
If you would like to be added to this map, please send your name,
URL (e.g.
you page in the Jmol wiki [1]) and longtitude and latitude, with
four digits,
like 50.0563, to this mailing list.
Gonzalo Claros.
http://av.bmbq.uma.es/bma/a
Nico,
That sounds like an excellent feature for Bioclipse using CDK
functionality. Let me know if you are interested in writing up the hack,
and me and Egon can help you get started.
Cheers,
.../Ola
On Thu, 2006-04-13 at 19:46 +0200, Nicolas Vervelle wrote:
> Hi,
>
> is there a tool to mer
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