[Jmol-users] 10.3 ongoing development test location

2006-04-27 Thread Bob Hanson
I've started a new development test site at http://www.stolaf.edu/people/hansonr/jmol/test/10.3 currently these files illustrate enhanced Spartan file reading capabilities. I'll try to add new illustrations of anything we add to Jmol here. Bob Hanson ---

[Jmol-users] Approaching deadlines - 3Dsig: Structural Bioinformatics & Computational Biophysics

2006-04-27 Thread 3Dsig06
3Dsig: A Structural Bioinformatics and Computational Biophysics satellite meeting of the ISMB conference will take place on August 4-5, at Fortaleza, BRAZIL. http://3dsig.weizmann.ac.il/ Active participants in 3Dsig's program and/or scientific committee include: Phil Bourne, Steven Brenner, Wah Ch

Re: [Jmol-users] Jmol applets in MediaWiki and Wikipedia

2006-04-27 Thread Bob Hanson
I think it's probably a dead issue. Angel Herraez wrote: El 27 Apr 2006 a las 6:24, Bob Hanson escribió: Be aware that not all browsers support .focus(). I haven't looked at [..snip..] *Hotjava 3* has buggy support. The example on this page works, but *Netscape 4 on Linux* does support

Re: [Jmol-users] Jmol applets in MediaWiki and Wikipedia

2006-04-27 Thread Nicolas Vervelle
Nicolas Vervelle wrote: Bob Hanson wrote: fascinating! Comments: 1. I suggest be Ok Done 2. : Size of the applet. Does that mean it's always square? Currently, yes. But that would be a thing to add. Added in the TODO list 3. Two valuable options we should probably consid

Re: [Jmol-users] Jmol applets in MediaWiki and Wikipedia

2006-04-27 Thread Nicolas Vervelle
Bob Hanson wrote: On second thought, I think this probably is a legacy issue, at least with Windows. The following should probably be checked by a variety of Mac users: http://www.stolaf.edu/people/hansonr/jmol/test/testfocus.htm Thanks for the test page. I will wait a little to see if pe

Re: [Jmol-users] Jmol applets in MediaWiki and Wikipedia

2006-04-27 Thread Nicolas Vervelle
Angel Herraez wrote: El 27 Apr 2006 a las 14:09, [EMAIL PROTECTED] escribió: I have authorized uploading .cml, .pdb and .xyz files. Nico, I suggest you add also .MOL (common for us in small moelcules) Done --- Using Tomcat

Re: [Jmol-users] Jmol applets in MediaWiki and Wikipedia

2006-04-27 Thread Frieda Reichsman
On Apr 27, 2006, at 8:15 AM, Bob Hanson wrote:On second thought, I think this probably is a legacy issue, at least with Windows. The following should probably be checked by a variety of Mac users:http://www.stolaf.edu/people/hansonr/jmol/test/testfocus.htmWorks perfectly for me in Safari 2 and Fire

Re: [Jmol-users] Jmol applets in MediaWiki and Wikipedia

2006-04-27 Thread Angel Herraez
El 27 Apr 2006 a las 6:24, Bob Hanson escribió: > Be aware that not all browsers support .focus(). I haven't looked at [..snip..] > *Hotjava 3* has buggy support. The example on this page works, but > *Netscape 4 on Linux* does support it, but when you lay the focus on > *Opera 3 and 4* refuse to

Re: [Jmol-users] Jmol applets in MediaWiki and Wikipedia

2006-04-27 Thread Angel Herraez
El 27 Apr 2006 a las 14:09, [EMAIL PROTECTED] escribió: > I have authorized uploading .cml, .pdb and .xyz files. Nico, I suggest you add also .MOL (common for us in small moelcules) --- Using Tomcat but need to do more? Need to support web se

Re: [Jmol-users] Jmol applets in MediaWiki and Wikipedia

2006-04-27 Thread nvervell
De: "Angel Herraez" <[EMAIL PROTECTED]> > >Just from reading the doc, this looks wonderful functionality. > >Congratulations, Nico! Thanks :) --- Using Tomcat but need to do more? Need to support web services, security? Get stuff done quickl

Re: [Jmol-users] Jmol applets in MediaWiki and Wikipedia

2006-04-27 Thread Bob Hanson
On second thought, I think this probably is a legacy issue, at least with Windows. The following should probably be checked by a variety of Mac users: http://www.stolaf.edu/people/hansonr/jmol/test/testfocus.htm Bob Hanson wrote: Be aware that not all browsers support .focus(). I haven't loo

Re: [Jmol-users] Jmol applets in MediaWiki and Wikipedia

2006-04-27 Thread nvervell
>Could someone please explain how to achieve the following code result > >Ethanol.xyz > > >When I try to upload a file, mediawiki tells me its not a recognised >image file, and refuses it. I guess a setting has to be tweaked somewhere >(perhaps even setting a chemical/x-xyz MIME type?) to allow

Re: [Jmol-users] Jmol applets in MediaWiki and Wikipedia

2006-04-27 Thread Rzepa, Henry
Could someone please explain how to achieve the following code result Ethanol.xyz When I try to upload a file, mediawiki tells me its not a recognised image file, and refuses it. I guess a setting has to be tweaked somewhere (perhaps even setting a chemical/x-xyz MIME type?) to allow this? -

Re: [Jmol-users] Jmol applets in MediaWiki and Wikipedia

2006-04-27 Thread Bob Hanson
Be aware that not all browsers support .focus(). I haven't looked at this in a while, and maybe that's just "legacy browser" thinking. But it's something to worry about. See http://www.quirksmode.org/js/support.html#focus The following quote from that site is a bit dated, so perhaps there is

Re: [Jmol-users] Jmol applets in MediaWiki and Wikipedia

2006-04-27 Thread Angel Herraez
Just from reading the doc, this looks wonderful functionality. Congratulations, Nico! --- Using Tomcat but need to do more? Need to support web services, security? Get stuff done quickly with pre-integrated technology to make your job easier D

Re: [Jmol-users] Jmol applets in MediaWiki and Wikipedia

2006-04-27 Thread Angel Herraez
El 26 Apr 2006 a las 17:25, Bob Hanson escribió: > Nico, you need a random number in that "windowTitle" variable. [..snip..] > So the classic solution to this is to assign a unique number > in that second parameter of open(). Another choice is to bring tha pop-up window to the front (with the ne