I have added four string functions and refer to this now as 11.1.16
capabilities.
Jmol Users -- initial documentation for new 11.1.16 capabilities are
given here. Part III.
The new syntax for Jmol scripting "molecular math" allows selection of
sets of atoms and bonds using {...}. By itself, th
Hi John
How about setting a javascript function that will do the job three times, one
for each applet?
-
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Is there a way to select and hence color certain bonds blue or
whatever or to have some bonds wireframe 0.1 and some wireframe 0.2?
I'm particularly thinking of Newman projections where a difference is
needed between "front" and "back".
http://www.stolaf.edu/academics/chemapps/jmol/docs/ind
Angel Herraez wrote:
>I have observed this behaviour with Jmol application, 11.0, WinXP :
>
>1)
>Top menu: File > New
>opens a new window -useful
>But then, closing the new window (either by menu or clicking on the
>windows close button) also closes the first one! Not so useful :-(
>
>
>
congra
Hello
I have a page with three applets (loaded columns in a table row , B-
A- and Z DNA) with a set of radio buttons for each applet in the same
table row. I want to have a single set of radio buttons that relate
to all three applets at once. I can set up buttons outside the
table and
On Thursday 01 March 2007 18:41:49 Angel Herraez wrote:
> I have observed this behaviour with Jmol application, 11.0, WinXP :
>
> 1)
> Top menu: File > New
> opens a new window -useful
> But then, closing the new window (either by menu or clicking on the
> windows close button) also closes the firs
I have observed this behaviour with Jmol application, 11.0, WinXP :
1)
Top menu: File > New
opens a new window -useful
But then, closing the new window (either by menu or clicking on the
windows close button) also closes the first one! Not so useful :-(
2)
Also, there is still the old question t
oops - I misspoke --
I said:
you need to insert the command
file 0
which makes all the files you loaded "displayable" (but not displayed)
BUT I was incorrect.
"file 0" actually does display all the files loaded.
So instead say
so say:
jmolApplet(300, 'load "fileset" "1BZ8.pdb" "1C26.pdb";
you need to insert the command
file 0
which makes all the files you loaded "displayable" (but not displayed)
so say
jmolApplet(300, 'load "fileset" "1BZ8.pdb" "1C26.pdb"; file 0; select
*/2; spacefill on;');
the last command is just to actually render the structure in a style,
choose whatev
ok thank you... Now when I do : jmolApplet(300, 'load "fileset" "1BZ8.pdb" "1C26.pdb"; select */1;');It shows 1BZ8 structure. But if i do : jmolApplet(300, 'load "fileset" "1BZ8.pdb" "1C26.pdb"; select */2;'); It shows nothing.. .is it normal ? Egon Willighagen a écrit :
On Thursday 01 March 20
On Thursday 01 March 2007 15:28:35 [EMAIL PROTECTED] wrote:
> The last method i tried is :
>
> print qq{
>
>
> jmolInitialize("../softs/jmol-10.2.0");
> jmolApplet(300, "load 'fileset'
> '../
thanx all for your help but I tried all the possibilities and it does not work...The last method i tried is :print qq{
jmolInitialize("../softs/jmol-10.2.0");
jmolApplet(300, "load 'f
Harris Procopiou wrote:
> I try to load multiple files but i can't... I 'm working with perl :
>
> print "
>
>
> jmolInitialize("Jmol.js");
> jmolApplet(300, "load "fileset" "1BZ8.pdb"
> "1C26.
Hi Harris,
On Thursday 01 March 2007 13:15:16 Harris Procopiou wrote:
> I try to load multiple files but i can't... I 'm working with perl :
>
> print "
>
>
> jmolInitialize("Jmol.js");
> jmolA
Hello Harris
Yes, it seems a quotes problem.
First, try this: Jmol requires double quotes for load, so you should
use single quotes for the javascript:
jmolInitialize('.');
jmolApplet(3
Thanks, Bob, I never seem to remember the /model syntax, and the last
solution is great - so simple.
Frieda
On Feb 28, 2007, at 11:48 PM, Bob Hanson wrote:
Frieda Reichsman wrote:
Say I have 3 files loaded but my set of labels should appear on only
one of them. I also want to be able to tur
Hi Harris,
jmolInitialize("Jmol.js");
is incorrect - in the parenthesis should be the path to the Jmol
applet. If the applet is in the same directory, use simple a single
dot (.).
Jmol.js must be referred to in the header, like this:
script>
I try to load multiple files but i can't... I 'm working with perl :
print "
jmolInitialize("Jmol.js");
jmolApplet(300, "load "fileset" "1BZ8.pdb"
"1C26.pdb"; select */2; color red;");
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