Re: [Jmol-users] RFC - new look for toolbar

The Jmol "J" is an even better idea -- well done! :) -Tom PS - Enjoy a well-earned holiday! On Tue, Jul 29, 2008 at 3:25 PM, Angel Herráez <[EMAIL PROTECTED]> wrote: > > Angel proudly presents... > >Jmol new look! > > Now I deserve my summer holidays, having done my quota of J

Re: [Jmol-users] RFC - new look for toolbar

Angel proudly presents... Jmol new look! Now I deserve my summer holidays, having done my quota of Jmol :-) On 28 Jul 2008 at 13:54, Thomas Stout wrote: > Oh, those are very good! I quite like that set > > "Kalzium" is a periodic table viewer, so perhaps not that confusi

Re: [Jmol-users] Selection in multiple models lacking model 1

Hi Eric, how are you doing? I had a suspicion and have just tried it: you can "select model=1.1", so: select all; color atoms translucent; select model=1.1; color atoms opaque; does what you want Oh, and you can also do "select model>1.5" to get all but the first 5 models Marvels of Jmol Math!

[Jmol-users] Selection in multiple models lacking model 1

Thanks to Chris Weichengerger and Angel Herraez for the insights in thread "Load command and NMR structures", regarding multiple model ensembles that lack a model numbered 1. How would I render the first model opaque and the second to Nth models translucent, in ensembles lacking model 1? Prese

[Jmol-users] Thomas - thanks - that's exactly it!!!!

Hi Thomas - Yes - that's exactly what I was looking for. !!! I have a presentation to make at SAP's "TechEd2008" in Las Vegas early September. If I could "lean on you" a little before that, please let me know via email at: [EMAIL PROTECTED] Thanks very much again for the prompt reply. Best

Re: [Jmol-users] JMol from javascript from Flash ?

Well, we have deployed an internal web page that feeds data to Jmol applets from a Flex app*, which is rendered to HTML as a Flash "movie", so I think the answer to your question is yes, although we have not attempted to embed Jmol within the Flash component itself. -Tom * It reads our databa

[Jmol-users] JMol from javascript from Flash ?

According to this link: http://www.adobe.com/devnet/flash/articles/external_interface.html an Adobe Flash component can call javascript. So since it's the case that javascript can invoke JMol (correct?), isn't it the case that any web application which can call a Flash component can also call

[Jmol-users] command echo in console

Hi All, When I enter a command in the console, it is no longer echoed in the output section of the console. This started occurring about two days ago. Any ideas as to what caused this effect? Karl - This SF.Net email is

[Jmol-users] Proteopedia Page of the Year Competition

Hi All, As you may already know, Proteopedia is a 3D wiki-encyclopedia for proteins and other molecules that can benefit from 3D visualization in Jmol. It uses MediaWiki software with the Jmol extension. The Proteopedia Page of the Year Competition has begun. The top prize is a 32GB iPod touch

Re: [Jmol-users] Load command and NMR structures

Chris Weichenberger escribió: > It also seems to be > inconsistent since the 'load' command asks for consecutive integers > starting with 1 whereas the 'frame'/'model' command requires the PDB model > number. I've checked the doc and it's correct, "frame" and "model" will use the PDB MODEL

Re: [Jmol-users] Load command and NMR structures

> Hi Chris > > I am not sure, but I recall that there may be a difference between internal > model number and sequential model number in Jmol "frame" or "model" > commands. > Check the docs and, in any case, try using number 3 (27 could be 1, first > model, so 29 is 3) Hola Angel, you seem to