Re: [Jmol-users] Coordination Compound Questions

2010-11-16 Thread Robert Hanson
On Tue, Nov 16, 2010 at 2:57 PM, Otis Rothenberger wrote: > Bob, > > I'm trying to make your script work on a local (served) file. There are > two file references in your script. I don't understand the second one, > and I suspect my substitution (below) is causing problems: > > var s = "/*\t"+

Re: [Jmol-users] Coordination Compound Questions

2010-11-16 Thread Otis Rothenberger
Bob, OK, I think I get it. To use log capability, I must use the signed applet. It's about time I set up a signed applet test page anyway. It is, indeed, a neat script. Otis Otis Rothenberger chemagic.com On 11/16/2010 8:38 AM, Robert Hanson wrote: OK, OK. Here's a neat script. -- A chir

Re: [Jmol-users] tab-filename-auto-completion in the Jmol Console not case sensitive and Jmol-12.1.23-binary.tar.gz containing too many files

2010-11-16 Thread Oliver Stueker
Hi Bob, just noticed you have submitted a fix in the SVN. I can confirm that branches/v12_0/Jmol at Revision: 14672 does the trick for me. Thanks a lot! Cheers, Oliver On Mon, Nov 15, 2010 at 12:34, Oliver Stueker wrote: > Hi Bob, > > First, thanks for fixing the file-dropper for Linux - wor

Re: [Jmol-users] Coordination Compound Questions

2010-11-16 Thread Otis Rothenberger
Bob, I'm trying to make your script work on a local (served) file. There are two file references in your script. I don't understand the second one, and I suspect my substitution (below) is causing problems: var s = "/*\t"+ i + "\t" + ept + " " + elements[ept] + "\t" + pt + "\t" + atoms +

Re: [Jmol-users] Coordination Compound Questions

2010-11-16 Thread Robert Hanson
OK, OK. Here's a neat script. -- A chiral octahedral compound generator! It opens $SF6 -- from the NIH CACTVS server, and for 1000 cycles it then randomly changes ligands, looking for errors in the algorithm by matching the structure to the stereochemical SMILES that Jmol creates for it. In addit