Re: [Jmol-users] multiple structures in cif files

2011-05-18 Thread Robert Hanson
That's the proper behavior. I'm pretty sure they would load that way anyway, if they were separate files. The 0 0 0 point is being used, of course, as the same point in each case. So you will have to center those yourself. Say I wanted to center model 1.2 on model 1.1. I would issue this: select {

Re: [Jmol-users] MSIE9 and Mouse Wheel

2011-05-18 Thread Rolf Huehne
On 05/18/2011 04:01 PM, Otis Rothenberger wrote: > Hi Rolf, > > I see the behavior that you describe in MSIE 9, Firefox (latest version), > and Chrome (latest version) under Windows 7. I do not see the same behavior > in this scrollable page: > > http://chemapps.stolaf.edu/jmol/docs/examples-11/new

Re: [Jmol-users] MSIE9 and Mouse Wheel

2011-05-18 Thread Otis Rothenberger
Hi Rolf, I see the behavior that you describe in MSIE 9, Firefox (latest version), and Chrome (latest version) under Windows 7. I do not see the same behavior in this scrollable page: http://chemapps.stolaf.edu/jmol/docs/examples-11/new.htm This suggests either a Jmol version problem or a prob

[Jmol-users] multiple structures in cif files

2011-05-18 Thread Pshemak Maslak
I have attempted to combine cif files of graphite, diamond and c60 into one file. The new file shows all three models (separately) as desired. However, each model is displayed off center, and is off rotation center when manipulated with a mouse, Is it possible to do the above (combining files

[Jmol-users] MSIE9 and Mouse Wheel

2011-05-18 Thread Rolf Huehne
Dear all, I noticed on my Windows 7 system that Internet Explorer 9 (MSIE9) 'steals' the mouse wheel information from Jmol (version 11.6.8) if the page is scrollable (e.g.: http://www.imb-jena.de/cgi-bin/3d_mapping.pl?CODE=1deh). In all other browsers (which I tested before) zooming with

Re: [Jmol-users] coloring of isosurface is not saved

2011-05-18 Thread Robert Hanson
The range should be saved; the colorScheme is not, though. You just apply that when you reload the file: isosurface "example.jvxl" colorScheme "rwb" 2011/5/18 Angel Herráez > I am creating a molecular isosurface colored by MEP > > isosurface molecular color range -2.2 0.0 colorScheme "rwb" map

[Jmol-users] coloring of isosurface is not saved

2011-05-18 Thread Angel Herráez
I am creating a molecular isosurface colored by MEP isosurface molecular color range -2.2 0.0 colorScheme "rwb" map mep; Then I save it to disk. When I load it, the coloring scheme is lost. In the jvxl file content I can see the original command, but it is not being applied. I can only fix it b