Re: [Jmol-users] Color group not symmetry?

2012-07-13 Thread Angel Herráez
Dear Eric, Have you tried color monomer instead of color group ? That could do it. It works as you describe for interrupted chains, so maybe too for your situation -- Live Security Virtual Conference Exclusive

Re: [Jmol-users] Color group not symmetry?

2012-07-13 Thread Eric Martz
Dear Bob, color monomer is not what I want. It colors the 3 segments of chain A each blue to red, separately (3 blue ends, 3 red ends). I want those three segments to be colored in a single blue to red sequence for all 3 (one blue end, one red end), just as color group does for the asymmetric

[Jmol-users] Model Selection

2012-07-13 Thread Otis Rothenberger
I use the following script to select and hide one of two models in a window: k = {*}.atomIndex.max + 1;t = {*}.atomIndex.min;select within(branch, {atomIndex = k}, {atomIndex=t}); hide selected Is there a way to run this in a loop of frames and apply it to frames based on frame number i: if

Re: [Jmol-users] Model Selection

2012-07-13 Thread Angel Herráez
Otis, maybe { model=i } ? e.g. this works: print {model=2}.atomindex.min -- Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT

Re: [Jmol-users] Model Selection

2012-07-13 Thread Otis Rothenberger
Angel, Bingo! That works. Thanks Otis -- Otis Rothenberger o...@chemagic.com http://chemagic.com On Jul 13, 2012, at 2:51 PM, Angel Herráez wrote: Otis, maybe { model=i } ? e.g. this works: print {model=2}.atomindex.min