Re: [Jmol-users] language localization for JSmol

2013-03-20 Thread Paul Pillot
After further testing, firefox displays JSmol in french as expected. chrome doesn't (still in english), the version number is the exact same as the one you described (apparently there is no cache concern involved) What is the language flag checked for enabling localization ? Paul Le 21 mars 201

Re: [Jmol-users] super light-weight JSmol?

2013-03-20 Thread Robert Hanson
Actually, this uses dojo, which is 100K itself. But that's still small enough, and I suspect one doesn't actually need dojo for this. So yes, possibly. On Wed, Mar 20, 2013 at 6:01 PM, Angel Herráez wrote: > > TwirlyMol maybe? > 14 kb! > > > > -

Re: [Jmol-users] language localization for JSmol

2013-03-20 Thread Robert Hanson
Paul, what does that console show (please click the "show" info link and find the information about the language, as Angel has shown). Could still be a version issue. It should read Jmol Version: 13.1.14_dev19 $Date: 2013-03-20 22:42:37 -0500 (Tue, 19 Mar 2013) $ You could also enter this in the

Re: [Jmol-users] Re-enabling Java for Jmol on OS X 10.8.3

2013-03-20 Thread Robert Hanson
iPad performance varies with version. Newer iPads are at least 2x faster than the original. Be sure you are referring to the latest rendition of JSmol -- huge improvements in performance lately. On Wed, Mar 20, 2013 at 4:47 PM, Rzepa Henry wrote: > A recent upgrade of OS X to 10.8.3 disabled

Re: [Jmol-users] super light-weight JSmol?

2013-03-20 Thread Angel Herráez
TwirlyMol maybe? 14 kb! -- Everyone hates slow websites. So do we. Make your web apps faster with AppDynamics Download AppDynamics Lite for free today: http://p.sf.net/sfu/appdyn_d2d_mar

[Jmol-users] super light-weight JSmol?

2013-03-20 Thread Robert Hanson
Jmol users, An idea is being considered to have a very light-weight "starter" model for small molecules in the JSmol suite that is not derived from Jmol but is instead from some other package. Kind of like what we were doing with ChemDoodle, but not having the licensing issues that come with that.

[Jmol-users] Re-enabling Java for Jmol on OS X 10.8.3

2013-03-20 Thread Rzepa Henry
A recent upgrade of OS X to 10.8.3 disabled Java on Safari (whilst Firefox remained OK). Turns out the issue was a failure by the Java sub system to communicate its presence correctly to Safari. If you have seen this syndrome, it can be fixed simply by visiting http://javatester.org/versi

Re: [Jmol-users] About adjustment of jmol applet window size by mouse

2013-03-20 Thread Alexander Rose
Hi, you could select just the C-alpha atom "select 79:C.CA; label Y79F" Best Alexander Am 20.03.2013 um 22:19 schrieb grid bird: > does anyone can give me suggestions about this label problem? thx. > > On Wed, Mar 20, 2013 at 2:04 PM, grid bird wrote: > Thanks. > > Currently, I am trying t

Re: [Jmol-users] About adjustment of jmol applet window size by mouse

2013-03-20 Thread grid bird
does anyone can give me suggestions about this label problem? thx. On Wed, Mar 20, 2013 at 2:04 PM, grid bird wrote: > Thanks. > > Currently, I am trying to label one selected residue in PDB structure. > I can select one residue using command, for example "select 79:C", but if > I label this res

Re: [Jmol-users] About adjustment of jmol applet window size by mouse

2013-03-20 Thread grid bird
thanks. I can get beautiful structure now. On Wed, Mar 20, 2013 at 2:08 PM, Paul Pillot < paul.pil...@ac-orleans-tours.fr> wrote: > plus > > set antialiasdisplay true > > -Paul > > Le 20 mars 2013 à 19:46, Angel Herráez a écrit : > > >> But the cartoons structure of my test applet looks not very

Re: [Jmol-users] language localization for JSmol

2013-03-20 Thread Angel Herráez
Console: The content text is in Spanish. The "close" link in the top yellow bar is in English (probably rightly so), as well as the buttons at the bottom. The popup menu shows in Spanish allright Firefox 19.0.2 navigator.userAgent = Mozilla/5.0 (Windows NT 6.1; WOW64; rv:19.0) Gecko/20100101 Fi

Re: [Jmol-users] language localization for JSmol

2013-03-20 Thread Paul Pillot
The message is still in english for me Tested on OSX.6 Chrome Version 25.0.1364.172 in french after clearing the cache. -Paul Le 20 mars 2013 à 20:54, Robert Hanson a écrit : > I've updated that after Angel's helpful tests. It should be working now: > > http://chemapps.stolaf.edu/jmol/jsmol/jsmo

Re: [Jmol-users] language localization for JSmol

2013-03-20 Thread Robert Hanson
I've updated that after Angel's helpful tests. It should be working now: http://chemapps.stolaf.edu/jmol/jsmol/jsmol.htm If your browser's default language is not English, could you please go to that page and click on "console" just below the applet and see if the message is in English or your la

Re: [Jmol-users] old Jmol, new JSmol

2013-03-20 Thread Richard Steane
-[part of] Original Message- From: Angel Herráez Sent: Wednesday, March 20, 2013 6:42 PM Megabytes, not Giga, right? I was scared :) That would be byte inflation! We've come along way from the 32K computer I started with! Richard Steane -

Re: [Jmol-users] About adjustment of jmol applet window size by mouse

2013-03-20 Thread Paul Pillot
plus set antialiasdisplay true -Paul Le 20 mars 2013 à 19:46, Angel Herráez a écrit : >> But the cartoons structure of my test applet looks not very smooth and has >> jagged edges. >> I am wondering if there are any other features to get smoother structure. > > It may depend on your particul

Re: [Jmol-users] About adjustment of jmol applet window size by mouse

2013-03-20 Thread Angel Herráez
> But the cartoons structure of my test applet looks not very smooth and has > jagged edges. > I am wondering if there are any other features to get smoother structure. It may depend on your particular molecule, but yes you can control smoothing of the cartoons. See the documentation: http://che

Re: [Jmol-users] old Jmol, new JSmol

2013-03-20 Thread Angel Herráez
> This is not an answer. It's a parallel question. Is this link the source for > the latest JSmol development update? > http://chemapps.stolaf.edu/jmol/jsmol.zip Yes, it is that, Otis Explained at http://wiki.jmol.org/index.php/Jmol_JavaScript_Object#Installation -

Re: [Jmol-users] old Jmol, new JSmol

2013-03-20 Thread Angel Herráez
> How do you tell? Is there a version number somewhere? There is a number inside the files, and in the popup menu. Bob was explaning this recently in another thread, maybe just yesterday. I know it's a big download, but I cannot find an explanation to your problem, so it might be a bug that sh

Re: [Jmol-users] old Jmol, new JSmol

2013-03-20 Thread Otis Rothenberger
Sorry about the premature send. This is not an answer. It's a parallel question. Is this link the source for the latest JSmol development update? http://chemapps.stolaf.edu/jmol/jsmol.zip Otis -- Otis Rothenberger o...@chemagic.com http://chemagic.com On Mar 20, 2013, at 1:54 PM, Richard S

Re: [Jmol-users] old Jmol, new JSmol

2013-03-20 Thread Otis Rothenberger
-- Otis Rothenberger o...@chemagic.com http://chemagic.com On Mar 20, 2013, at 1:54 PM, Richard Steane wrote: > Angel Herráez wrote: > Have you got the latest set of JSmol files? > > How do you tell? Is there a version number somewhere? > I presume I must download a full set, not just core.

Re: [Jmol-users] old Jmol, new JSmol

2013-03-20 Thread Richard Steane
Angel Herráez wrote: Have you got the latest set of JSmol files? How do you tell? Is there a version number somewhere? I presume I must download a full set, not just core.z.js. It's a 28,215 kb download, which unpacks to about 60 GB, then there's time uploading to my site. Or is there a shortcu

Re: [Jmol-users] old Jmol, new JSmol

2013-03-20 Thread Angel Herráez
> Thanks for this Angel. As far as I know the only HTML5 definition is > : > . I agree. And that makes our life easier. > I tried my testpage > http://www.biotopics.co.uk/jsmol/glucosetestcutdown.html recently > with IE7 on an old machine and it did not bring up the image. Yes, my copy of IE

Re: [Jmol-users] old Jmol, new JSmol

2013-03-20 Thread Richard Steane
Thanks for this Angel. As far as I know the only HTML5 definition is : . I tried my testpage http://www.biotopics.co.uk/jsmol/glucosetestcutdown.html recently with IE7 on an old machine and it did not bring up the image. Richard Steane -Original Message- From: Angel Herráez Sent:

Re: [Jmol-users] About adjustment of jmol applet window size by mouse

2013-03-20 Thread Angel Herráez
Hello, gridbird Welcome to Jmol! #1 > now I am wondering that is there any example in which the applet > window size can be adjusted by mouse The applet may be resized by javascript commands; mostly you could use http://jmol.sourceforge.net/jslibrary/#jmolResizeApplet But the example you sh

[Jmol-users] About adjustment of jmol applet window size by mouse

2013-03-20 Thread grid bird
Hi all, I am a newcomer to Jmol applet. I have scan through the examples, but now I am wondering that is there any example in which the applet window size can be adjusted by mouse not only can zoom in/out by mouse. just like this example here: http://mupit.icm.jhu.edu/AnnotationLookup?mut=259:A_c