[Jmol-users] java update security

2013-04-20 Thread Greeves, Nick
Hi Bob, This is getting annoying for those of us developing pages in Jmol! Still, in Safari (Mac OS) using MEDIUM in Java and from the optional Develop menu selecting Disable Local File Restrictions, I can get a local page to work. JRE version 1.7.0_21-b12 All the best Nick -- 3D Organic

Re: [Jmol-users] JSmol error

2013-04-20 Thread Pshemak Maslak
On 4/19/2013 6:05 PM, Robert Hanson wrote: right -- don't use Chrome for local file access. See the wiki. This is not a local file, it is on the server. The same thing happens in FireFox (except I do not have firebug installed). PM On Fri, Apr 19, 2013 at 9:38 AM, Pshemak Maslak

[Jmol-users] Carbohydrate definition: allose?

2013-04-20 Thread Eric Martz
Dear Angel, Bob, and others concerned with the definition of carbohydrate in Jmol: Apparently Jmol defines 'carbohydrate' as a list of carbohydrate residues that occur in the PDB: http://wiki.jmol.org/index.php/AtomSets/Carbohydrate Earlier I constructed my own such list for use within

Re: [Jmol-users] Carbohydrate definition: allose?

2013-04-20 Thread Robert Hanson
easy enough. Yes, carbohydrates are a bit of a pain. Adding [ALL] is no problem. On Sat, Apr 20, 2013 at 3:09 PM, Eric Martz ema...@microbio.umass.eduwrote: Dear Angel, Bob, and others concerned with the definition of carbohydrate in Jmol: Apparently Jmol defines 'carbohydrate' as a list of