Jmol (v14.1.16) is not agreeing with Java 7.65 update (both Windows and
OS X, several browsers).
The test page: http://chemapps.stolaf.edu/jmol/jsmol/jsmol.htm
JSmol/Java link works with Java 7.51, it does not load with Java 7.65
(no error messages, see below).
Does
On 17 Jul 2014, at 16:54, Pshemak Maslak n...@psu.edu wrote:
Jmol (v14.1.16) is not agreeing with Java 7.65 update (both Windows and
OS X, several browsers).
The test page: http://chemapps.stolaf.edu/jmol/jsmol/jsmol.htm
JSmol/Java link works with Java 7.51, it does not load with Java
I have just updated from Java 7.0_60 to 7.0_65 and the page
The test page: http://chemapps.stolaf.edu/jmol/jsmol/jsmol.htm
loads the Jmol_S applet just fine in Firefox 30, Win8.1
--after accepting the signed applet by Integrated Graphics dialog
I suggest that you thoroughly clean your java
1. Am I correct that isosurface solvent volume reports the volume
of the model? (I understand the distinction between solvent and
sasurface, and I prefer solvent.)
2. If yes, in what units? Cubic Angstroms?
3. With some large multi-chain protein assemblies, when I do
isosurface solvent, the
Does anyone have experience quantitating packing density, e.g. atoms
per unit volume?
I'm trying to do this using isosurface solvent volume to determine volume.
I'd like to know what others have found for specific cases. I'm
interested in proteins and large multi-chain protein assemblies.
On Thu, Jul 17, 2014 at 10:54 AM, Pshemak Maslak n...@psu.edu wrote:
Does ___JmolVersion=14.2.3_2014.07.12 works with Java 7.65? Where
can this version be downloaded?
The latest is currently at SourceForge. See
https://sourceforge.net/projects/jmol/files/
Hoping to get a bug-fix update in
On Thu, Jul 17, 2014 at 11:33 PM, Eric Martz ema...@microbio.umass.edu
wrote:
1. Am I correct that isosurface solvent volume reports the volume
of the model? (I understand the distinction between solvent and
sasurface, and I prefer solvent.)
yes
2. If yes, in what units? Cubic Angstroms?
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