OK, I see what’s doing it:
Jmol.evaluateVar(jmolApplet0,"show('chemical inchi')”) VS
Jmol.evaluateVar(jmolApplet0,"show('chemical stdinchi')”)
I did not know that Resolver would do inch and stdinchi
Otis
--
Otis Rothenberger
o...@chemagic.org
http://chemagic.org
> On Mar 7, 2016, at 1:47 AM
Bob,
Neat.
I'm a bit confused by the Resolver InChI report. It states 1/... "Calculate
here" shows 1S/...
I think Resolver only reports 1S/... - standard InChI.
Are the results possibly cross-reported? One is standard InChI and the other is
not.
Otis
--
Otis Rothenberger
o...@chemagic.org
h
It's very important to do this test. Please report what you find.
On Sun, Mar 6, 2016 at 11:25 AM, Robert Hanson wrote:
> If you open a console and instead use
>
> print load(".file name...")
>
> then you will see the contents of that file. Or, for that matter, you just
> do that in your bro
Try the following
1. Check *.htaccess* file if present, for file access permission.
2. Check access permission for that directory/file *chmod* (like *755* or
*777*).
3.Check the file path *inside* or *outside* the directory of the webpage.
4. If the file is present outside the directory, use *../*
http://chemapps.stolaf.edu/jmol/jsmol/inchi.htm
demonstrates a new option - calculating an InChI in JavaScript from a JSmol
model.
The InChI code is a bit heavy -- 800K.
Interesting to compare with what NCI/CADD returns.
Necessary files are in http://chemapps.stolaf.edu/jmol/jsmol/inchi
The Ja
It says that "You don't have permission to access that file". Maybe it is
permission issue. Do you know why it becomes permission issue?
Best Regards,
Rojan
From: Robert Hanson
Sent: Sunday, March 6, 2016 12:25:33 PM
To: jmol-users@lists.sourceforge.net
Subje
Le 06/03/2016 18:23, Robert Hanson a écrit :
> See https://docs.moodle.org/30/en/Jmol_filter where it indicates that you
> need
> to add a search item ?i=0 to your URL:
Nice... it's work !
I use moodle 2.9 and read the 2.9 documentation where "?i=0" is not documented
but it's work with this ver
That is typo mistake indeed both are same.
From: Angel Herráez
Sent: Sunday, March 6, 2016 1:57:21 PM
To: jmol-users@lists.sourceforge.net
Subject: Re: [Jmol-users] "Unrecognized file format for file ..."
Rojan ,
why the difference in file name between your 2 exa
File path is correct. I have already checked.
From: Robert Hanson
Sent: Sunday, March 6, 2016 12:25:33 PM
To: jmol-users@lists.sourceforge.net
Subject: Re: [Jmol-users] "Unrecognized file format for file ..."
If you open a console and instead use
print load("...
Rojan ,
why the difference in file name between your 2 examples?
./chpdb/a0/1a0b.A.pdb
./test/1a0b.pdb
Could that be the cause the file is not found?
--
___
Jmol-us
If you open a console and instead use
print load(".file name...")
then you will see the contents of that file. Or, for that matter, you just
do that in your browser. That is a standard result of getting an HTTP "File
Not Found" message from the server.
On Sat, Mar 5, 2016 at 9:21 PM, Rojan S
See https://docs.moodle.org/30/en/Jmol_filter where it indicates that you
need to add a search item ?i=0 to your URL:
*?i=0* results in the interactive structure being displayed directly (i.e.
with no cover image). This may result in page load delays if, say, multiple
Jmol objects are present in
Hello Christian
That is a feature of JSmol that may or not be enabled. It may involve one of
these options:
- coverImage
- deferApplet
- deferUncover
(most probably the 2nd) They are described in
http://wiki.jmol.org/index.php/Jmol_JavaScript_Object/Info#Startup_period
It seems that the desi
Hello,
I use jmol filter in moodle and I have a problem with it.
When I include a molecule in my moodle, the applet work fine, but I need to
click on the applet. (button with circular arrow and "activat 3D model"
hint) (view screenshot)
How can I activate automaticaly the model, without clicking
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