[Jmol-users] molecule moving parts

Hello, I know it is possible to move an entire molecule in Jmol, but is it also possible to move only part of the molecule? For example, a student would like to show a protein binding to a molecule. Perhaps it would be possible by combining multiple PDB files? Thanks. -- Daniel Barich Barich

[Jmol-users] Jsmol page buttons not working

Hi everybody, Could somebody look at this page for me? The molecule loads, but none of the buttons work. The JavaScript console shows an undefined method in jsmol.min.js even though I set up the latest download from SourceForge.

Re: [Jmol-users] Jsmol page buttons not working

On Fri, Jun 14, 2013 at 3:33 PM, Otis Rothenberger osrot...@chemagic.comwrote: Daniel, Try a global declaration of myJmol - i.e. var myJmol; Otis -- Otis Rothenberger o...@chemagic.com http://chemagic.com On Jun 14, 2013, at 3:24 PM, Daniel Barich wrote: I added a DOCTYPE

Re: [Jmol-users] Jsmol page buttons not working

Sorry for the blank message. I'm using the var keyword now and the buttons still don't work. I tested using the Control + Shift + J console in Chrome, and myJmol is created as a Canvas2D object. On Fri, Jun 14, 2013 at 4:01 PM, Daniel Barich bari...@kenyon.edu wrote: On Fri, Jun 14, 2013

Re: [Jmol-users] JSmol upload

I still can't open this link in Windows Explorer either. It says the file is invalid. On Thu, Mar 28, 2013 at 2:59 PM, Oliver Stueker revilo2...@users.sourceforge.net wrote: Hi, The jsmol.zip that I have just downloaded seems to be broken: $ unzip jsmol.zip Archive: jsmol.zip

Re: [Jmol-users] IE9 not working with my page

, 2013 at 2:29 PM, Daniel Barich bari...@kenyon.edu wrote: I can't get IE9 to run JSmol on my page. Any idea why? http://biology.kenyon.edu/BMB/biomolecules.htm Thanks. Daniel -- Everyone hates slow websites. So

[Jmol-users] IE9 not working with my page

I can't get IE9 to run JSmol on my page. Any idea why? http://biology.kenyon.edu/BMB/biomolecules.htm Thanks. Daniel -- Everyone hates slow websites. So do we. Make your web apps faster with AppDynamics Download

Re: [Jmol-users] old Jmol, new JSmol

at 7:30 PM, Daniel Barich bari...@kenyon.edu wrote: Here's the error I get with my page at http://biology.kenyon.edu/BMB/biomolecules.htm: getValue MINIMIZATIONCallback = null getValue PICKCallback = null getValue RESIZECallback = null getValue SCRIPTCallback = null getValue SYNCCallback

Re: [Jmol-users] old Jmol, new JSmol

I updated to the latest version of jmol. The molecule was working fine before, but now it works in Chrome but not in Firefox. Any idea why? http://biology.kenyon.edu/BMB/biomolecules.htm Thanks. Daniel On Fri, Mar 15, 2013 at 2:22 PM, Robert Hanson hans...@stolaf.edu wrote: sorry --

Re: [Jmol-users] old Jmol, new JSmol

myJmol_object__269579045037469__ ready call loadScript jsmol\core\corescript.z.js call loadScript jsmol\J\util\Point4f.js Jmol._readyCallback failed java.lang.IndexOutOfBoundsException On Fri, Mar 15, 2013 at 6:02 PM, Daniel Barich bari...@kenyon.edu wrote: I updated to the latest version of jmol

Re: [Jmol-users] JSMol not working with JSmol.min.js

- Safari (most recent) Mac Lion. Otis -- Otis Rothenberger o...@chemagic.com http://chemagic.com On Feb 27, 2013, at 4:16 PM, Daniel Barich wrote: My page is still not working, and neither is this sample page on my jsmol installation: http://biology.kenyon.edu/BMB/jsmol/simple2

Re: [Jmol-users] JSMol not working with JSmol.min.js

My page is still not working, and neither is this sample page on my jsmol installation: http://biology.kenyon.edu/BMB/jsmol/simple2.htm Does this link work for anyone else. The other examples work, but my page still doesn't work. The link again is: