Thus far I have been using the Jmol application, but the web version might
prove easier for other users, so I should probably familiarize myself with
it.
Sincerely,
James Ryley
From: Robert Hanson [mailto:hans...@stolaf.edu]
Sent: Monday, June 03, 2013 4:14 PM
To: jmol-users
enerate script files which only contain Jmol commands because it isn't
clear to me how/where one merges those commands with Javascript.
Sincerely,
James Ryley
From: Robert Hanson [mailto:hans...@stolaf.edu]
Sent: Monday, June 03, 2013 3:03 PM
To: jmol-users@lists.sourceforge.net
plish these tasks already. Is it possible to go from an
ATOM/HETATM to a SITE entry, to a REMARK 800 entry, get the
SITE_DESCRIPTION, alter it, and have the alterations be saved when the pdb
file is saved?
Sincerely,
James Ryley
---
Hi Rob,
Assuming that none of the molecular model formats support saving either
general visible annotations or atom labels, and that the solution is to
write an SPT, JMOL or PNGJ, as Rob suggested, that would be perfect if JMol
was the only program other users needed. But, the actual modeling m
Hi Angel,
Thanks for the info. With respect to this:
> > Assuming that none of the molecular model formats support saving
> > either general visible annotations or atom labels, and that the
> > solution is to write an SPT, JMOL or PNGJ, as Rob suggested, that
> > would be perfect if JMol was the
cumentation/File_Formats).
I'm guessing there is no simple answer, but any suggestions would be great.
Sincerely,
James Ryley, PhD, RPA
SumoBrainSolutions Intellectual Property Solutions, Consulting & Data
Providers of:
AcclaimIP Patent Analytics Platform for Search &
on about which features should be assumed to work
(I'm particularly thinking of when using "write
CD|MOL|PDB|SDF|V2000|XYZ|XYZRN|XYZVIB ", but if there things it would ignore
on "load", that would be very useful to know also), and which do not?
Si
Greetings,
I've been using JMol for a while, mostly via scripting. It has been very
useful for me, and Robert Hanson has been kind enough to answer some
questions for me concerning particular ways of outputting graphics. So
thanks to everyone working on this! Note that I did search the list arc
8 matches
Mail list logo
