Re: [Jmol-users] JSME Fun

2016-04-29 Thread Robert Hanson
On Thu, Apr 28, 2016 at 11:25 PM, Otis Rothenberger wrote: > Bob, > > I was aware of the Jmol integration of JSME and JSpecView, but I did not > know that auto sync 2D to 3D was an option - i.e. as the 2d drawing grows > the 3d model is automatically updated with no transfer button click > requir

Re: [Jmol-users] JSME Fun

2016-04-28 Thread Otis Rothenberger
Bob, I was aware of the Jmol integration of JSME and JSpecView, but I did not know that auto sync 2D to 3D was an option - i.e. as the 2d drawing grows the 3d model is automatically updated with no transfer button click required. Am I reading you correctly on this: jmol = Jmol.getApplet("jmol"

Re: [Jmol-users] JSME Fun

2016-04-28 Thread Robert Hanson
Oh, and JSmol on that jsv_predict2.htm page is using special "all-atom" SMILES calls to find the mapping between JSpecView, JSmol, and JSME, since the MOL file coming back from JSpecView is not the mol file sent to it. It's critical in this case that every atoms - especially the H atoms -- are sync

Re: [Jmol-users] JSME Fun

2016-04-28 Thread Robert Hanson
Otis, that's very interesting. Nice job on that. I think you are forgetting, though, that JSME is fully integrated into JSmol already. You do not need to add any functions of your own. If you look at the code for chemapps.stolaf.edu/jmol/jsmol/jsmetest2.htm, you will see that JSME integrates into

[Jmol-users] JSME Fun

2016-04-28 Thread Otis Rothenberger
Maybe someone pointed this out before, but it’s new to me... The page below is an ongoing test page that I use, so there are some button and screen message issues (conflicts). Nevertheless one new JSME point is so much fun that I thought I’d point it out: http://chemagic.org/molecules/mini2.htm