Re: [Jmol-users] R: Re: R: Re: R: JSmol -- Are we done?

2012-12-17 Thread Michael Evans
Exactly. Creating the nested unordered list is straightforward; perhaps only the Menu component of jQuery UI will be necessary. Stay tuned. --- Michael Evans Organic Chemistry Graduate Student, Moore Group University of Illinois, Urbana-Champaign On Mon, Dec 17, 2012 at 12:37 PM, Robert Hanson

Re: [Jmol-users] R: Re: R: Re: R: JSmol -- Are we done?

2012-12-17 Thread Robert Hanson
oh -- so -- great! Please let me know what you figure out. I like the idea of using jQuery. See if you can identify the minimum amount of code (jQueryUI.js, more?) that is necessary to implement this. I assume you mean something like what is shown at http://jqueryui.com/menu/ right? Bob On Mo

Re: [Jmol-users] R: Re: R: Re: R: JSmol -- Are we done?

2012-12-17 Thread Robert Hanson
yes, and these are dynamically produced, so basically between the time the person right-clicks and the time the menu is displayed it is largely recreated. Bob On Mon, Dec 17, 2012 at 11:47 AM, Michael Evans wrote: > Bob, > Not sure if anyone has touched base with you about this off-list, but I

Re: [Jmol-users] R: Re: R: Re: R: JSmol -- Are we done?

2012-12-17 Thread Michael Evans
Bob, Not sure if anyone has touched base with you about this off-list, but I played around with making a simple popup menu using jQuery. Parsing a .tab to produce the appropriate menu structure shouldn't be too difficult; figuring out submenus will be the trickiest part. Some time just became avail

Re: [Jmol-users] R: Re: R: Re: R: JSmol -- Are we done?

2012-12-16 Thread Robert Hanson
continuing this thread -- The only things missing from JSmol now, as far as I can tell, include: -- popup menu -- modelKit mode (no menu for that) -- language translation -- actual console Of these, it seems to me the popup menu might be the easiest to implement. Any ideas on that which would not

Re: [Jmol-users] R: Re: R: Re: R: JSmol -- Are we done?

2012-12-08 Thread Robert Hanson
This is done. We now have full script queuing, try/catch, function, delay, move, moveTo, compare, timeout, animation, spin, and vibration in JSmol. On Fri, Nov 30, 2012 at 11:53 AM, Robert Hanson wrote: > OK, I remember: script queuing, as well as quit and exit commands. Very > challenging with

Re: [Jmol-users] R: Re: R: Re: R: JSmol -- Are we done?

2012-11-30 Thread Robert Hanson
OK, I remember: script queuing, as well as quit and exit commands. Very challenging with asynchronous execution of scripts, which I introduced to handle move, moveTo, delay, timeout, animation, spin, and vibration commands. Have to think hard on that this week end. On Wed, Nov 28, 2012 at 7:26 PM

Re: [Jmol-users] R: Re: R: Re: R: JSmol -- Are we done?

2012-11-28 Thread Robert Hanson
got it. -- required modifications to JSmoljQuery.js and JSmolCore.js Safari should be reading binary files properly now. http://chemapps.stolaf.edu/jmol/jsmol/test2.htm?USE=HTML5 -- "water.xyz.gz" or "mo homo SQUARED" links in HTML5 -- Robert M. Hanson Larson-Anderson Professor of Chemistry C

Re: [Jmol-users] R: Re: R: Re: R: JSmol -- Are we done?

2012-11-28 Thread Jeff Hansen
I'm seeing the same thing. I just did a system update to 10.7.5 then updated Safari to 6.0.2. I emptied the cache (Developer menu - turn on in Advanced tab of Preferences). I can load the caffeine molecule using HTML5. When I try to do the MO examples in the middle of the middle column I get

Re: [Jmol-users] R: Re: R: Re: R: JSmol -- Are we done?

2012-11-28 Thread Jeff Hansen
I just checked some more. Now when I load using the HTML5 option in the first column then try to thread test, I get the non-recognized format error. The mo homo SQUARED and mo DENSITY also give the non-recognized format error. If I click on the WebGL load link the thread test does not give th

Re: [Jmol-users] R: Re: R: Re: R: JSmol -- Are we done?

2012-11-28 Thread Angel Herráez
No idea But my server was giving me trouble serving some pdb and mol files. Maybe it's related. I could fix that by renaming to .pdb.txt or .mol.txt (this was with a former version of JSmol, I have not checked lately) The error was in the form of garbage characters in red font inside the JSmol

[Jmol-users] R: Re: R: Re: R: JSmol -- Are we done?

2012-11-28 Thread pino.stricc...@libero.it
Angel, i cleared the cache. Now the applet seems to load but when i load a molecule i receive format non recognized error. No javascript error in console (firefox or google chrome). Could be a problem of Jquery libraries that are different? a conflict? Pino >Messaggio originale >Da: an