You're almost there. There are a few ways of doing this, but here's the
simplest.
# Task 0:
load files "protein.mol2" "ligand.mol"
# Task 1:
select within(6.0, true, {model=2.1}) and {model!=2.1}
(This "TRUE" parameter is new -- it indicates that you want to do
cross-model checking.)
#Task 2:
Noel O'Boyle wrote:
> I am just starting to use Jmol and I would really appreciate some help...
>
> I have a protein file, and I have a ligand file. Task 1 is to select
> only those protein atoms within 6Ang of the ligand. Task 2 is to
> display only these selected atoms. Task 3 is to draw the iso
I am just starting to use Jmol and I would really appreciate some help...
I have a protein file, and I have a ligand file. Task 1 is to select
only those protein atoms within 6Ang of the ligand. Task 2 is to
display only these selected atoms. Task 3 is to draw the isosurface of
the selected atoms.
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