Re: [Jmol-users] animation questions

2007-05-15 Thread Bob Hanson
I was thinking more "only with the application" -- but yes, it works with either the application or the signed applet. Probably one of THE nicest features of the signed applet -- many people wouldn't need any data files on their machine at all. Bob Angel Herraez wrote: >El 14 May 2007 a las

Re: [Jmol-users] animation questions

2007-05-15 Thread Angel Herraez
El 14 May 2007 a las 17:56, Bob Hanson escribió: > load files "=1crn" "=1blu" "=1hje" > > It means "Go get these files from RCSB directly; I don't have them on my > computer" > I'm starting to use this so that anyone can run the script and it should > work for them same as for me. No files requ

Re: [Jmol-users] animation questions

2007-05-14 Thread Frieda Reichsman
On May 14, 2007, at May 14, 6:56 PM, Bob Hanson wrote: This works perfectly when I do not have my state script between the load and the animation commands. But I have a state script to load and set up all the file display options, then the anim is triggered with a button. Any idea where to

Re: [Jmol-users] animation questions

2007-05-14 Thread Bob Hanson
Frieda Reichsman wrote: > Hi Bob, Documentation for set backgroundmodel needs to be corrected, > it currently specifies (integer >= 1) > We need to take a good look at the documentation in relation to multiple files. > On May 14, 2007, at May 14, 5:52 PM, Bob Hanson wrote: > >> Ah, Frieda, you

Re: [Jmol-users] animation questions

2007-05-14 Thread Frieda Reichsman
Hi Bob, Documentation for set backgroundmodel needs to be corrected, it currently specifies (integer >= 1) I *knew* there was a reason I had not tried file.model notation! :^) - should have tried it anyway!! On May 14, 2007, at May 14, 5:52 PM, Bob Hanson wrote: Ah, Frieda, you MUST use f

Re: [Jmol-users] animation questions

2007-05-14 Thread Frieda Reichsman
On May 14, 2007, at May 14, 5:52 PM, Bob Hanson wrote: Ah, Frieda, you MUST use file.model notation with multiple files anywhere you would like to say "model n". Especially with PDB files, "set backgroundModel 1" would be too ambiguous. For example: load files "=1crn.pdb" "=1blu.pdb" "=1hje.pd

Re: [Jmol-users] animation questions

2007-05-14 Thread Bob Hanson
hmm, a state save bug on that. Will fix Bob Frieda Reichsman wrote: > I'm looking for some scripting help. Using Jmol 11.1.38_dev, > I am attempting an animation with four files. Each has one model. FIle > 1 has an isosurface. Bob just wrote a nice post the other day re: > frames and multi

Re: [Jmol-users] animation questions

2007-05-14 Thread Bob Hanson
Ah, Frieda, you MUST use file.model notation with multiple files anywhere you would like to say "model n". Especially with PDB files, "set backgroundModel 1" would be too ambiguous. For example: load files "=1crn.pdb" "=1blu.pdb" "=1hje.pdb" animation mode palindrome animation fps 1 set backgrou

[Jmol-users] animation questions

2007-05-14 Thread Frieda Reichsman
I'm looking for some scripting help. Using Jmol 11.1.38_dev, I am attempting an animation with four files. Each has one model. FIle 1 has an isosurface. Bob just wrote a nice post the other day re: frames and multiple files, but I am stuck nonetheless. I need to make file 1 stay visible thro