Re: [Jmol-users] mmCIF reader bug found

2015-11-02 Thread Robert Hanson
somehow that build did not get done properly on the JavaScript side. Looks to me that it is specific to the JSmol in that the Java application itself has no problem. So I will re-release that. On Mon, Nov 2, 2015 at 4:36 AM, wrote: > I'm afraid I'm still seeing problems with the mmcif reader: >

Re: [Jmol-users] mmCIF reader bug found

2015-11-02 Thread simon
I'm afraid I'm still seeing problems with the mmcif reader: Jmol Version: 14.4.0_2015.10.22b 2015-10-22 13:25 FileManager.getAtomSetCollectionFromFile(http://www.rcsb.org/pdb/files/4jdg.cif) FileManager opening url http://www.rcsb.org/pdb/files/4jdg.cif The Resolver thinks MMCif loadClass J.adapt

Re: [Jmol-users] mmCIF reader bug found

2015-10-29 Thread Robert Hanson
Sorry -- yes, definitely. That link should now be to "2015.10.22b" On Thu, Oct 29, 2015 at 9:53 AM, wrote: > Hi Bob > > Has this been fixed yet? > > Cheers > > Simon > > > Quoting Robert Hanson : > > > that bug did not get fixed for JavaScript, unfortunately. Will update > later > > tonight. > >

Re: [Jmol-users] mmCIF reader bug found

2015-10-29 Thread simon
Hi Bob Has this been fixed yet? Cheers Simon Quoting Robert Hanson : > that bug did not get fixed for JavaScript, unfortunately. Will update later > tonight. > > On Thu, Oct 22, 2015 at 7:41 AM, Robert Hanson wrote: > >> Jmol.___JmolVersion="14.5.0_2015.10.22" >> >> bug fix: CIF parser fails

Re: [Jmol-users] mmCIF reader bug found

2015-10-22 Thread Robert Hanson
that bug did not get fixed for JavaScript, unfortunately. Will update later tonight. On Thu, Oct 22, 2015 at 7:41 AM, Robert Hanson wrote: > Jmol.___JmolVersion="14.5.0_2015.10.22" > > bug fix: CIF parser fails to read CIF files containing only a single > (non-loop) _struct_ref_seq_dif.align_id

[Jmol-users] mmCIF reader bug found

2015-10-22 Thread Robert Hanson
Jmol.___JmolVersion="14.5.0_2015.10.22" bug fix: CIF parser fails to read CIF files containing only a single (non-loop) _struct_ref_seq_dif.align_id https://sourceforge.net/projects/jmol/files/latest/download This update is probably only important if you use Jmol in a database that reads MMCIF f