I will look these over carefully. I think there are some inconsistencies
that need reconciling.
Bob
--
___
Jmol-users mailing list
Jmol-users@lists.sourceforge.net
https://lists.
On 09/25/2015 07:56 AM, Robert Hanson wrote:
> Your keys are only "1" and "2" -- there are no "res" anythings at that
> level.
>
Yes, because I thought the '**' was specially for searching at the
second level.
Wouldn't it be more consistent if it would be 'xxx*' (etc.) and not
'xxx**' when only t
Your keys are only "1" and "2" -- there are no "res" anythings at that
level.
$ print selectTest("1** where resName='VAL'")
{
"1" :
{
"resName" : "VAL"
"resNumber" : 1
"siteMembers" :
[
{
"resName" : "VAL"
"resNumber" : 10
}
{
On 09/16/2015 07:00 AM, Robert Hanson wrote:
> new feature: JmolSQL {associative array}.select("xxx** where...")
>-- double * indicates desire to return full sub-arrays, with keys
>-- "all keys starting with "xxx";
>-- uses LIKE
>-- can be at beginning or end or both: xxx**, **xxx,
On 09/23/2015 02:04 PM, Robert Hanson wrote:
> First thought is that we should leave it this way. That is really really
> bad programming.
> Fixed.
>
Actually there is one case in Jmol where it is needed:
If the loop variable is supposed to be part of an automatically
actualized echo message. I
(I was referring to the reuse of var i and global i; actually this was
failing for any global)
Will update later in the day.
On Wed, Sep 23, 2015 at 7:04 AM, Robert Hanson wrote:
> First thought is that we should leave it this way. That is really really
> bad programming.
> Fixed.
>
> On Wed,
First thought is that we should leave it this way. That is really really
bad programming.
Fixed.
On Wed, Sep 23, 2015 at 6:40 AM, Rolf Huehne wrote:
> On 09/22/2015 07:33 PM, Robert Hanson wrote:
> > http://chemapps.stolaf.edu/jmol/zip/jmol-14.3.16_2015.09.22.zip
> >
> > Jmol.___JmolVersion="1
On 09/22/2015 07:33 PM, Robert Hanson wrote:
> http://chemapps.stolaf.edu/jmol/zip/jmol-14.3.16_2015.09.22.zip
>
> Jmol.___JmolVersion="14.3.16_2015.09.22"
>
> bug fix: for(var x in ...) does not respect "var"
>
Now a new global variable cannot be used in a 'for' loop:
Example Code --
http://chemapps.stolaf.edu/jmol/zip/jmol-14.3.16_2015.09.22.zip
Jmol.___JmolVersion="14.3.16_2015.09.22"
bug fix: for(var x in ...) does not respect "var"
bug fix: x.format("JSON") fails for recursive x
-- arrays or associative arrays can be recursive
-- detection of recursion during SHOW, x
Great test!
This was a problem with the for(var x in...) not respecting the "var"
--
___
Jmol-users mailing list
Jmol-users@lists.sourceforge.net
https://lists.sourceforge.net/li
On 09/22/2015 03:46 AM, Robert Hanson wrote:
> I think this is the essence of a deep copy:
>
> function deepCopy(a) {
>switch (a.type) {
>case "hash":
> var b = {};
> for (var i = a.keys.length; i > 0; --i) {
>var key = a.keys[i];
>b[key] = deepCopy(a[key]);
>
Jmol.___JmolVersion="14.3.16_2015.09.21b"
new feature: x = @a
-- deep copy for a = array or associative array
-- @a for string variable still gets the value of the variable named by
variable a
-- math environment only, not SELECT
On Mon, Sep 21, 2015 at 8:46 PM, Robert Hanson wrote:
> I
I think this is the essence of a deep copy:
function deepCopy(a) {
switch (a.type) {
case "hash":
var b = {};
for (var i = a.keys.length; i > 0; --i) {
var key = a.keys[i];
b[key] = deepCopy(a[key]);
}
return b;
case "array":
var b = [];
for (var j = a.le
On 09/18/2015 04:38 PM, Robert Hanson wrote:
> Oh, I mistyped. I did not mean to add that colon.
>
> Use of "*" and/or "," leads to copying, but we may want to rethink how that
> works. *only that level* is copied. If there are references in there to
> deeper levels, those levels are not copied. I
Oh, I mistyped. I did not mean to add that colon.
Use of "*" and/or "," leads to copying, but we may want to rethink how that
works. *only that level* is copied. If there are references in there to
deeper levels, those levels are not copied. I have to think if there is a
straightforward way to do
Hmm. Curious. I will check to see what is going on there.
On Thu, Sep 17, 2015 at 9:11 AM, Rolf Huehne wrote:
> On 09/16/2015 08:27 PM, Robert Hanson wrote:
> > Use of "*:"or "," does result in copying. Use of the actual key does
> not:
> >
> > $ x = { "b": 4,"a": 3,"d": { "d2": 4,"d1": },
On 09/16/2015 08:27 PM, Robert Hanson wrote:
> Use of "*:"or "," does result in copying. Use of the actual key does not:
>
> $ x = { "b": 4,"a": 3,"d": { "d2": 4,"d1": },"c": 5 }
> $ y = x.d
> $ y.d1 = 0
> $ print x.format("JSON")
>
> *{ "b": 4,"a": 3,"d": { "d2": 4,"d1": 0 },"c": 5 }*
> $ y
Use of "*:"or "," does result in copying. Use of the actual key does not:
$ x = { "b": 4,"a": 3,"d": { "d2": 4,"d1": },"c": 5 }
$ y = x.d
$ y.d1 = 0
$ print x.format("JSON")
*{ "b": 4,"a": 3,"d": { "d2": 4,"d1": 0 },"c": 5 }*
$ y = x.select("d,")
$ y.d1 = -1
$ print x.format("JSON")
*{ "b
On 09/16/2015 07:00 AM, Robert Hanson wrote:
> new feature: JmolSQL {associative array}.select("xxx** where...")
>-- double * indicates desire to return full sub-arrays, with keys
>-- "all keys starting with "xxx";
>-- uses LIKE
>-- can be at beginning or end or both: xxx**, **xxx,
Hoooray!
Some interesting issues there.
JSME and 2D/3D - It turns out that JSME has two modes of delivery of
SMILES -- "canonize" and "nocanonize". These are not dynamically
switchable, as far as I can tell. I wish they were. The problem is that
"canonize" delivers aromatic symbols for rings th
On Wed, Sep 16, 2015 at 8:09 AM, Paul PILLOT wrote:
>
> The only remaining glitch is in the test2.htm page that displays 2 still
> images in the forefront, having the active molecule displayed ind the
> background.
> It appears on the two browsers I’ve checked. It doesn’t appear in any of
> the o
You’re right : jsmol.htm indeed works like a charm !
Paul
> Le 16-09-2015 à 09:16, J. Bays a écrit :
>
> Paul: I think that is intentional. Try jsmol.htm. It is the same test without
>
> J. Philip Bays
> Emeritus Professor of Chemistry
> Saint Mary's Collegethe images.
> Norte Dame, IN
>
> S
Paul: I think that is intentional. Try jsmol.htm. It is the same test
without
J. Philip Bays
Emeritus Professor of Chemistry
Saint Mary's Collegethe images.
Norte Dame, IN
Sent from my iPad
On Sep 16, 2015, at 9:10 AM, Paul PILLOT wrote:
Everything works as expected (including localization al
Everything works as expected (including localization alerts, filter2D,
fractional coordinates shorthand notation) ! Thanks a lot Bob !
The only remaining glitch is in the test2.htm page that displays 2 still images
in the forefront, having the active molecule displayed ind the background.
It app
simple.htm runs ok now here, without errors and the language is correct (it
also was before)
On 16 Sep 2015 at 0:00, Robert Hanson wrote:
> http://sourceforge.net/projects/jmol/files/Jmol-beta/Jmol%2014.3/Jmol%2014.3.16/Jmol-14.3.16_
> 2015.09.15-binary.zip
>
> Jmol.___JmolVersion="14.3.16_2015
http://sourceforge.net/projects/jmol/files/Jmol-beta/Jmol%2014.3/Jmol%2014.3.16/Jmol-14.3.16_2015.09.15-binary.zip
Jmol.___JmolVersion="14.3.16_2015.09.15"
bug fix: JSmol does not automatically start non-English language
bug fix: JSME's noncanonical SMILES does not match Jmol's standard SMILES
f
26 matches
Mail list logo
