Re: [Libmesh-users] Petsc slowness on a single processor machine

2009-03-03 Thread STEPHANE TCHOUANMO
..@msn.com > CC: libmesh-users@lists.sourceforge.net > Date: Tue, 3 Mar 2009 13:42:24 -0600 > Subject: Re: [Libmesh-users] Petsc slowness on a single processor machine > > > Thanks Ben. > > > > I use mpich2-1.0.7. > > > > After a discussion with PETSc dev

Re: [Libmesh-users] Petsc slowness on a single processor machine

2009-03-03 Thread Kirk, Benjamin (JSC-EG311)
> Thanks Ben. > > I use mpich2-1.0.7. > > After a discussion with PETSc developpers, the problem might come from lots of > allocation made by LibMesh within the call of PETSc. In fact if you look at > the PETSc log summary of the problem I solve, you can clearly see that most of > the time (more

Re: [Libmesh-users] Petsc slowness on a single processor machine

2009-03-03 Thread STEPHANE TCHOUANMO
t; To: tchou...@msn.com > CC: libmesh-users@lists.sourceforge.net > Date: Sun, 1 Mar 2009 14:53:25 -0600 > Subject: Re: [Libmesh-users] Petsc slowness on a single processor machine > > > > Thanks for your answer Roy, > > > > I use libmesh-0.6.2 and petsc-2.3.3-p13 v

Re: [Libmesh-users] Petsc slowness on a single processor machine

2009-03-01 Thread Kirk, Benjamin (JSC-EG311)
> Thanks for your answer Roy, > > I use libmesh-0.6.2 and petsc-2.3.3-p13 versions. > I sent a mail to petsc users and we'll see what they say about that > VecScatterCreate. > Right now im checking whats going on in petsc_vector.C. > Hope to get the answer quick. What MPI are you using? VecScat

Re: [Libmesh-users] Petsc slowness on a single processor machine

2009-02-24 Thread Roy Stogner
On Tue, 24 Feb 2009, STEPHANE TCHOUANMO wrote: > I use libmesh-0.6.2 and petsc-2.3.3-p13 versions. > I sent a mail to petsc users and we'll see what they say about that > VecScatterCreate. > Right now im checking whats going on in petsc_vector.C. You might also try 0.6.3 or the SVN libMesh to s

Re: [Libmesh-users] Petsc slowness on a single processor machine

2009-02-24 Thread STEPHANE TCHOUANMO
05 -0600 > From: royst...@ices.utexas.edu > To: tchou...@msn.com > CC: libmesh-users@lists.sourceforge.net > Subject: Re: [Libmesh-users] Petsc slowness on a single processor machine > > > On Tue, 24 Feb 2009, STEPHANE TCHOUANMO wrote: > > > The built linear system&#x

Re: [Libmesh-users] Petsc slowness on a single processor machine

2009-02-24 Thread Roy Stogner
On Tue, 24 Feb 2009, STEPHANE TCHOUANMO wrote: > The built linear system's size is 3 and its resolution lasts > about a hour on a single processor machine (my laptop...). I run > for that a hundred time steps and have in average 4 Newton > iterations per time step. So a hour seems huge to me

[Libmesh-users] Petsc slowness on a single processor machine

2009-02-24 Thread STEPHANE TCHOUANMO
Hi, I use the class petsc_nonlinear_solver to solve a nonlinear convection-diffusion type equation in porous media. The built linear system's size is 3 and its resolution lasts about a hour on a single processor machine (my laptop...). I run for that a hundred time steps and have in average