Re: [lustre-discuss] problem getting high performance output to single file

2015-05-19 Thread Nguyen Viet Cuong
David, You are right, there is a lock. As Patrick mentioned, https://jira.hpdd.intel.com/browse/LU-1669 will solve your problems. Please check it out. In my own experience, Lustre 2.7.0 client does solve such problem very well, and I got a very good performance so far. Regards, Cuong On Wed, Ma

Re: [lustre-discuss] problem getting high performance output to single file

2015-05-19 Thread David A. Schneider
We do use checksums, but can't turn it off. It know we've measured some performance penalty with checksums. I'll check about configuring lustre clients to to use RDMA. We ran into something similar where our MPI programs were not taking advantage of the infini-band - we noticed much slower mess

Re: [lustre-discuss] problem getting high performance output to single file

2015-05-19 Thread Patrick Farrell
Ah. I think I know what¹s going on here: In Lustre 2.x client versions prior to 2.6, only one process on a given client can write to a given file at a time, regardless of how the file is striped. So if you are writing to the same file, there will be little to no benefit of putting an extra proce

Re: [lustre-discuss] problem getting high performance output to single file

2015-05-19 Thread Mohr Jr, Richard Frank (Rick Mohr)
> On May 19, 2015, at 1:44 PM, Schneider, David A. > wrote: > > Thanks for the suggestion! When I had each rank run on a separate compute > node/host, I saw parallel performance (4 seconds for the 6GB of writing). > When I ran the MPI job on one host (the hosts have 12 cores, by default we >

Re: [lustre-discuss] problem getting high performance output to single file

2015-05-19 Thread Schneider, David A.
nt. best, David Schneider From: Mohr Jr, Richard Frank (Rick Mohr) [rm...@utk.edu] Sent: Tuesday, May 19, 2015 9:15 AM To: Schneider, David A. Cc: lustre-discuss@lists.lustre.org Subject: Re: [lustre-discuss] problem getting high performance output to si

Re: [lustre-discuss] problem getting high performance output to single file

2015-05-19 Thread Schneider, David A.
David Schneider From: Jeff Johnson [jeff.john...@aeoncomputing.com] Sent: Tuesday, May 19, 2015 9:11 AM To: Schneider, David A.; Patrick Farrell; John Bauer; lustre-discuss@lists.lustre.org Subject: Re: [lustre-discuss] problem getting high performance output to single fil

Re: [lustre-discuss] problem getting high performance output to single file

2015-05-19 Thread Mohr Jr, Richard Frank (Rick Mohr)
> On May 19, 2015, at 11:40 AM, Schneider, David A. > wrote: > > When working from hdf5 and mpi, I have seen a number of references about > tuning parameters, I haven't dug into this yet. I first want to make sure > lustre has the high output performance at a basic level. I tried to write a C

Re: [lustre-discuss] problem getting high performance output to single file

2015-05-19 Thread Jeff Johnson
el5 best, David Schneider From: Patrick Farrell [p...@cray.com] Sent: Tuesday, May 19, 2015 9:03 AM To: Schneider, David A.; John Bauer; lustre-discuss@lists.lustre.org Subject: Re: [lustre-discuss] problem getting high performance output to single fil

Re: [lustre-discuss] problem getting high performance output to single file

2015-05-19 Thread Schneider, David A.
, 2015 9:03 AM To: Schneider, David A.; John Bauer; lustre-discuss@lists.lustre.org Subject: Re: [lustre-discuss] problem getting high performance output to single file For the clients, cat /proc/fs/lustre/version For the servers, it¹s the same, but presumably you don¹t have access. On 5/19/15

Re: [lustre-discuss] problem getting high performance output to single file

2015-05-19 Thread Patrick Farrell
15 8:52 AM >To: lustre-discuss@lists.lustre.org >Subject: Re: [lustre-discuss] problem getting high performance output to >single file > >David > >You note that you write a 6GB file. I suspect that your Linux systems >have significantly more memory than 6GB meaning your fil

Re: [lustre-discuss] problem getting high performance output to single file

2015-05-19 Thread Schneider, David A.
Bauer [bau...@iodoctors.com] Sent: Tuesday, May 19, 2015 8:52 AM To: lustre-discuss@lists.lustre.org Subject: Re: [lustre-discuss] problem getting high performance output to single file David You note that you write a 6GB file. I suspect that your Linux systems have significantly more memory tha

Re: [lustre-discuss] problem getting high performance output to single file

2015-05-19 Thread John Bauer
David You note that you write a 6GB file. I suspect that your Linux systems have significantly more memory than 6GB meaning your file will end being cached in the system buffers. It wont matter how many OSTs you use as you probably are not measuring the speed to the OST's, but rather, you a

Re: [lustre-discuss] problem getting high performance output to single file

2015-05-19 Thread Nguyen Viet Cuong
Which versions are you using in servers and clients? On Wed, May 20, 2015 at 12:40 AM, Schneider, David A. < david...@slac.stanford.edu> wrote: > I am trying to get good performance with parallel writing to one file > through MPI. Our cluster has high performance when I write to separate > files,

[lustre-discuss] problem getting high performance output to single file

2015-05-19 Thread Schneider, David A.
I am trying to get good performance with parallel writing to one file through MPI. Our cluster has high performance when I write to separate files, but when I use one file - I see very little performance increase. As I understand, our cluster defaults to use one OST per file. There are many OST