Hello Kai,
There are many ways to script the command-line version of the contig
mover. One possibility would be to use find, e.g.:
find . -name "*.draft.fasta" -exec ./run_mcm.sh {} \;
you will need to make a 3 line script called run_mcm.sh with the
following contents:
#!/bin/bash
RESULTSDIR=`b
Hi Prabh, this sounds like it may be a problem with the input sequence
files. Can you check that they are in valid FastA or Genbank format and
contain only IUPAC characters?
Best,
-Aaron
On Tue, 2015-04-07 at 09:18 +1000, Prabh Basra wrote:
> Hi,
>
>
> I am trying to align 9 bacterial genomes
Hi Amarin, I realize this reply is coming a bit late but hopefully
better late than never. There was a nasty bug in 2.4.0 which caused
frequent crashes. It's fixed in a snapshot release that was made in late
February. I've now linked the snapshot directly from the download page
on the Mauve site:
h
