Re: [Mauve-users] malloc error with Mauve Contig Mover-

2017-01-09 Thread Eugeni Belda
Hello Aaron, Thanks a lot for your quick response. I’ve checked and there was a problem apparently with sequence IDs; after sequence renaming MCM works fine. All the best Eugeni > On 9 Jan 2017, at 12:26, Aaron Darling wrote: > > Hi Eugeni, > Before the malloc error, the aligner issued a warni

Re: [Mauve-users] malloc error with Mauve Contig Mover-

2017-01-09 Thread Aaron Darling
Hi Eugeni, Before the malloc error, the aligner issued a warning message about the file CAG00011_hs9.9_v3.fna, which contains characters or formatting that the software was not expecting in a FastA file. I suggest carefully checking that file first. -Aaron On Mon, 2017-01-09 at 10:44 +0100, Eugeni

[Mauve-users] malloc error with Mauve Contig Mover-

2017-01-09 Thread Eugeni Belda
Hello, I’m trying to reorder a set of E.coli contigs from a draft metagenomic assembly (5000 contigs approximately) against the reference E. coli K12-MG1335 sequence using the MCM option of Mauve, but the following error message appears on Mauve console: Copying... /Users/Eugeni/Documents/ICAN/Ant