[Mauve-users] exited with error code:134

Hi again Aaron, Trying to repeat the same alignments I have already done, I found a new error: Exited with error code: 134 Thanks so much for our help Cristina. PD. Here you have the code: --- Running alignment. Executing /Applications/Mauve 2.4.0/Mauve.app/Contents/MacOS/pro

Re: [Mauve-users] annotations not loaded

n, hopefully it will work for you too > until a bugfix can be put in the next release. > > Best, > -Aaron > > On Fri, 2015-03-13 at 13:17 +1100, cav4 wrote: > > Dear Aaron, > > I made an alignment of 15 bacterial strains months ago and had no problem > &g

[Mauve-users] annotations not loaded

Dear Aaron, I made an alignment of 15 bacterial strains months ago and had no problem until now. I reopened it yesterday... and try again today a few times, and the found the problem that annotations are not loaded, so alignment is basically useless for my purposes. It's happened to me few times

[Mauve-users] exited with error 134

Dear Aaron, Here I copi the lines correspondent to a new exited error while starting an alignment of bacterial genomes. Thank you in advance for the tip to solve it. Cristina --- Running alignment. Executing /Applications/Mauve 2.4.0/Mauve.app/Contents/MacOS/progressiveMauve --output

Re: [Mauve-users] mauveAligner exited with an error code

rk. > > Best, > -Aaron > > On Thu, 2015-01-29 at 11:27 +0900, cav4 wrote: > > Dear Aaron, > > > > Sorry for constantly bothering you. > > I've been running alignment of complete bacterial genomes that I have > > downloaded from ncbi. Not

[Mauve-users] mauveAligner exited with an error code

Dear Aaron, Sorry for constantly bothering you. I've been running alignment of complete bacterial genomes that I have downloaded from ncbi. Not a big work, only 5 genomes ob about 4Mb maximum. After successfully aligned the 5 of them and a subset of 3... I wanted to align only 2 of them and an e

Re: [Mauve-users] Mauve downloading problems in MacOX Yosemite + Windows Exited error code:3

> the aligner was doing right before it crashed. Best to send the whole > > log if possible, although if it's big then maybe better to email it to > > me off-list. > > > > Cheers, > > -Aaron > > > > > > On Thu, 2015-01-22 at 16:33 +11

Re: [Mauve-users] Mauve downloading problems in MacOX Yosemite + Windows Exited error code:3

Dear Aaron, Thank you for your quick reply. I simply downloaded the new version v2.4.0 and it seems to work properly. I lunched yesterday an alignment of 16 bacterial g enomes, about 3Gb each, and is still working... so is great. I think now the only limitation is the RAM memory as I use my p e

[Mauve-users] Mauve downloading problems in MacOX Yosemite

Dear Aaron, I've been using Mauve for long time to align and visualize bacterial genome. I've recently updated my Mac system to MacOX Yosemite, and for the first time tried to lunch MAUVE application (2.3.1 version). A message requiring me to update and download the Java ES 6 module, that was re

[Mauve-users] MAUVE (annotations not loaded)

Dear mauve-users support, My knowledge in Bioinformatics are rather limited, but I was familiar with MAUVE because I used it during my PhD a few years ago. I used to perform progressive alignments of multiple drag genomes by using embl (. embl) or genbank (.bg or .gbk) files as input and I obta