Hi Eleni,
Although progressiveMauve's algorithm is deterministic for a fixed
input, the algorithm itself contains some stochastic elements,
especially when aligning regions between the initial set of unique
alignment anchors. Therefore, changes to the input such as order of
genomes, or possibly ord
Images didn't come through, sorry. Please see attached.
On Wed, Mar 1, 2017 at 12:01 PM, Eleni Mijalis
wrote:
> Hey there,
>
> I am having issues with getting different alignment results based on the
> ordering of input files.
>
> I am aligning 7 genomes, and this is these are two examples of al
