Hi Raquel,
I've not observed this bug in the past. Would it be possible for you to
share the input files on which you observe this behavior (off-list)? One
possibility is that BioJava is unable to parse one of the sequence files
you are using, but it's not clear whether it's that or another problem
Hello,
I was trying to score my assembly with Mauve assembly metrics, but the run was
not completed. It seems to have started out fine, but at the end of it, I got
these messages:
java.lang.ArrayIndexOutOfBoundsException: -1
at org.gel.mauve.assembly.AssemblyScorer.computeContigSizeStat
