Dear Dr. Oskooi,
Thank you for your reply.
2) With the above workaound, all tests passed except tests/wvg_src.py:
--------------------------------------------------------------------------
mpirun noticed that process rank 0 with PID 0 on node gromit exited
on signal 11 (Segmentation fault).
--------------------------------------------------------------------------
FAIL tests/wvg_src.py (exit status: 139)
My hunch is that there was a failure somewhere during the MPB build
("make && make check && sudo make install") which precedes the Meep
build in the shell script. MPB was therefore not installed as a
library in /usr/local/lib on your system. This is what caused Meep's
tests/wvg_src.py to fail since this test involves the eigenmode source
feature which requires MPB to be installed as a library dependency.
Your hunch was right.
I was trying to use intel mkl, which is incompatible with libfftw3_mpi
[https://github.com/stevengj/mpb/issues/8].
Using openblas instead, everything seems to be fine.
With best regards,
Munehiro Nishida
_______________________________________________
meep-discuss mailing list
meep-discuss@ab-initio.mit.edu
http://ab-initio.mit.edu/cgi-bin/mailman/listinfo/meep-discuss