Re: [Meep-discuss] [MPB-discuss] Multicore-CPU and GPUlocalhost/

2010-06-28 Thread Bruck Roman
Dear Miguel! MEEP or FDTD in general would indeed benefit much from GPU's. I tried it once. There was a freeware solution "fastFDTD" using nVidia GPU's. The speed was incredible high. You gain a factor of 10 in speed very easily. But the software was completely unstable, full of bugs and no supp

Re: [Meep-discuss] Memory estimation for a 3D problem

2010-03-16 Thread Bruck Roman
Dear Benjamin! On our cluster MEEP in 3D with complex fields takes about 1.2 GB per 10^6 mesh points (this values varies, but you can take it as an estimation). You have 20 x 6 x 13 x 100^3 = 1560 * 10^6 points So I would estimate your memory requirements to about 2000GB. If you don't have acces

Re: [Meep-discuss] Continued with hdf5 thing

2010-01-25 Thread Bruck Roman
We already had this topic. HDF5 output on NFS is very slow. Please find below the answer from Steven in the thread "[Meep-discuss] HDF5 creating file slow on NFS (fwd)". We are also using NFS and output is very slow, but so far I had no time to change the file system, so I cannot tell if another

Re: [Meep-discuss] HDF5 creating file slow on NFS

2009-12-14 Thread Bruck Roman
Dear Steven, dear other MEEP-users! I followed the discussion with interest about NFS and HDF5 because we have similar experience. But what are the alternatives to NFS? If running meep-mpi on a cluster, every process needs access to the output directory. So you need to share the directory to al

Re: [Meep-discuss] MPI efficiency

2009-01-14 Thread Bruck Roman
Dear Nizamov, dear Ben, dear Meep-users! We are working at Intel quad core xeon processors and I can confirm only little acceleration when using more than 1 core on the same CPU (20 - 30%). To my knowledge the limiting factor is not the computational power of the processors, it's the interface

[Meep-discuss] Thread control with meep-mpi

2008-11-26 Thread Bruck Roman
Dear Steven, dear meep users! When starting meep-mpi on a distributed computer system, is it possible to influence which thread starts on which computer? We are starting several threads per computer and that on several computers. It would be advantageous if neighboring simulation domains would

Re: [Meep-discuss] How do I get meep-mpi to work?

2008-11-25 Thread Bruck Roman
Dear Neal! We are working on Intel quad-core Xeon processors and it's the same. The limiting factor is not the computational power of the processors, it's the interface to the system memory. As in Intel processors all cores share the same front side bus, execution times decrease very little wh

[Meep-discuss] Problems with flux-in-box and output with parallel Meep

2008-10-22 Thread Bruck Roman
Dear Steven, dear Meep users! I want to "measure" the energy, that is radiated away from a continuous source with a Gaussian beam shape. So I use the "flux-in-box " procedure. This is my .ctl-file: (set! force-complex-fields? true) (define-param PreTime 100) (define-param Angle 45) (d