Hi Tomas,
I'm not sure, but I believe this would not change that much my workflow
neither the nature of the results, since we are working on GC/MS data
and usually not using bins bigger than 1, neither any other parameter
from the "Chromatogram Builder" altering/filtering the signal (like "Min
Hi Gauthier, Chris,
I was wondering about your typical usage pattern of the baseline correction
module. Since the baseline correction algorithms take chromatograms as an
input, wouldn't it make more sense to perform it after running the Chromatogram
builder?
Chris, could you remind me what was
Hi Yee-Soon,
And one more thing, since i'm using Thermo QqQ to collect my data under parent
ion scan mode, do u mind to tell me what's the parameter range for example, the
mass tolerance (either m/z or ppm) or the noise signal. It is a bit complicate
and i'm a new user to MZmine. I believe the
G'day,
I think you probably have an R configuration issue. Could you please
share your .BAT file please.
Also add the following lines to your .BAT file directly after the line
that sets JRI_LIB_PATH:
rem Some debug.
set
dir "%R_HOME%"
dir "%R_HOME%\bin\x64"
dir "%JRI_LIB_PATH%"
This will pro
G'day Chris,
Sorry for late reply as i dig this mail from the junk mail box (for some
reason it went there).
Yes, I had installed the R as you told me and i had set all the parameters.
Yet the baseline correction still has the problem when i tried to run
baseline correction, the MZmine window just
G'day,
I've been on leave so have only just come across the thread regarding
baseline-correction problems.
Yee-Soon did you manage to resolve this issue?
The error message you showed indicates that you haven't customised the
start-up script file correctly (startMZmine_Windows.bat).
Getting
