Re: [Mzmine-devel] startMZmine scripts

2015-06-02 Thread TFRD (Thomas Franck Dyrlund)
. /Thomas -Original Message- From: Tomas Pluskal [mailto:[email protected]] Sent: 2. juni 2015 16:12 To: Developer discussion Subject: Re: [Mzmine-devel] startMZmine scripts Hi Thomas, A good idea, although I think the JAVA_COMMAND parameter should be added to the top list. In case there are

Re: [Mzmine-devel] startMZmine scripts

2015-06-02 Thread Tomas Pluskal
Hi Thomas, A good idea, although I think the JAVA_COMMAND parameter should be added to the top list. In case there are multiple JVMs or if the JVM is located in a non-standard place, the user may want to point to a specific java.exe location. Cheers, Tomas > On Jun 2, 2015, at 11:00 PM, TFR

[Mzmine-devel] startMZmine scripts

2015-06-02 Thread TFRD (Thomas Franck Dyrlund)
With the move to Rserve, a lot of the old parameters have now been removed from the start scripts and a lot of new code has been added. But basically the user now only optionally need to change the following three values: - HEAP_SIZE - MZMINE_STATISTICS - TMP_FILE_DIRECTORY I therefore suggest a