Re: [Mzmine-devel] Clustering module

2011-01-24 Thread Tomas Pluskal
Hi Sandra, > I don't think it is a good idea to remove PCA or Sammon's. In the context of > clustering, PCA or Sammons are just visualization tools (add ons) > but in general, you would like also to visualize the original clinical > grouping of samples. For clustering PCA visualization I only

Re: [Mzmine-devel] Clustering module

2011-01-24 Thread Castillo Sandra
Should I change it? I am going to work on the help files now. Sandra From: Tomas Pluskal [plus...@oist.jp] Sent: 24 January 2011 03:41 To: Developer discussion Subject: Re: [Mzmine-devel] Clustering module Hi Sandra, It looks good :) The progress bar

Re: [Mzmine-devel] Clustering module

2011-01-23 Thread Tomas Pluskal
Hi Sandra, It looks good :) The progress bar does not update during calculation, can that be fixed? Also, what is the key to assign the colors in the final plot? Are you going to keep the current PCA and Sammons projection modules, or should these be removed? Tomas On Jan 21, 2011, at 5:25 PM,