[Nix-dev] What am I doing wrong with ssh-substitutor-hosts?

2015-04-02 Thread Jeffrey David Johnson
I've got two computers with nixos, and I can ssh between them without a password. But if I do a nixos-rebuild with `--option ssh-substitutor-hosts ` they still just download everything from cache.nixos.org. I think I have the sshServe set up in my configuration.nix: # nixServeKeys are loaded fro

Re: [Nix-dev] [***SPAM***] git:// repositories in nixpkgs

2015-03-27 Thread Jeffrey David Johnson
At least on github there's always an equivalent https:// url right? On Fri, 27 Mar 2015 12:49:04 -0400 Shea Levy wrote: > fetchurl has a concept of multiple urls and mirrors, I’m not sure if fetchgit > does but it would be nice for this use case. git:// should be preferred when > it is usable,

Re: [Nix-dev] Getting started with nix-build

2015-03-24 Thread Jeffrey David Johnson
Yeah I'd like to know this too. I suspect there's a flag for it but not sure what it would be called. Also if you're building the latext nixpkgs from github hydra might not have cought up yet. I think standard practice is to stay a few commits back so can get binaries. I asked a semi-related qu

[Nix-dev] NixOps doesn't work with EC2 anymore?

2015-03-21 Thread Jeffrey David Johnson
I'm trying to set up a server for my lab to do bioinformatics. I'm following the manual here: I got to the `deploy` step but then Amazon gives me an this error: error: EC2ResponseError: 400 Bad Request

Re: [Nix-dev] Regex in manifest breaks nix-env

2015-03-17 Thread Jeffrey David Johnson
st use the user profile for testing and have my long-term package lists in a separate git repo. Jeff On Tue, 17 Mar 2015 18:26:26 +0100 Eelco Dolstra wrote: > Hi, > > On 17/03/15 18:11, Jeffrey David Johnson wrote: > > > Hi all! My nix-env commands recently stopped working. For

[Nix-dev] Regex in manifest breaks nix-env

2015-03-17 Thread Jeffrey David Johnson
Hi all! My nix-env commands recently stopped working. For example if I try to `nix-env -q`, it says: error: syntax error, unexpected $undefined, expecting '"', at "/nix/store/ar83fv0d68frfyifz2wl1dm97m6jvxnn-env-manifest.nix":1:153 The contents of `/nix/store/ar83fv0d68frfyifz2wl1dm97m6jvxnn-env

[Nix-dev] Using R with Bioconductor

2015-03-08 Thread Jeffrey David Johnson
Do any of you guys/gals use R and Bioconductor? The only page I can find related to setting it up is . Bioconductor is a whole additional ecosystem on top of R/CRAN, with its own installer. You normally use it like: source("http://bioconductor.org/biocLite.R";) b

[Nix-dev] Help packaging BLAST?

2015-02-24 Thread Jeffrey David Johnson
Hi! The existing BLAST package (https://github.com/NixOS/nixpkgs/blob/master/pkgs/applications/science/biology/ncbi-tools/default.nix) isn't working for me. Probably because it's broken on x64. So I'm trying to package the standalone executables from http://www.ncbi.nlm.nih.gov/books/NBK52640/

Re: [Nix-dev] "Disallowed host" while building Python packages?

2015-02-16 Thread Jeffrey David Johnson
-packages-generated.nix? They're formatted just like the non-generated ones so I'm thinking "generated" means some other process? Jeff On Mon, 16 Feb 2015 09:30:16 +0100 Rok Garbas wrote: > Quoting Jeffrey David Johnson (2015-02-16 04:56:35) > > I've had this happen

[Nix-dev] "Disallowed host" while building Python packages?

2015-02-15 Thread Jeffrey David Johnson
I've had this happen a couple times now when trying to build Python packages. An error like: Searching for paste Note: Bypassing https://pypi.python.org/simple/paste/ (disallowed host; see http://bit.ly/1dg9ijs for details). Couldn't find index page for 'paste' (maybe misspelled?) Scanning index

Re: [Nix-dev] Unstable Nixpkgs on stable NixOS (was: Automatically locking the screen with xautolock)

2015-02-10 Thread Jeffrey David Johnson
NIXCFG, and NIX_PATH to point to my repos let me avoid channels altogether? Thanks for writing this up! The environment variables, channels_root etc. are still sort of black magic to me and it helps. Jeff On Mon, 9 Feb 2015 19:17:46 -0800 Michael Alyn Miller wrote: > The 02/08/2015 12:21

Re: [Nix-dev] Automatically locking the screen with xautolock

2015-02-08 Thread Jeffrey David Johnson
Nice! I'm currently binding "gksu 'i3lock -c00 & pm-suspend'" to a hotkey using i3, but this is better. Is there a standard way to get it in my fork of nixpkgs, which is tracking the release-14.12 branch? (I could just copy and paste but if there's a better way now would be a good time to le

Re: [Nix-dev] Current path to installing on Raspberry Pi?

2015-02-04 Thread Jeffrey David Johnson
Don't think I'm brave enough quite yet. Getting closer though! Planning to do my first (unrelated) pull request tonight :D Thanks for the help. It sounds like a lot of progress is being made on the ARM build stuff so I'll just follow it for now and pitch out if there's something to do that doesn

Re: [Nix-dev] Nix OS installation problems - Where's the hard drive?

2014-10-11 Thread David Guibert
oking up inside $NIX_PATH. -- Regards, David ___ nix-dev mailing list nix-dev@lists.science.uu.nl http://lists.science.uu.nl/mailman/listinfo/nix-dev

Re: [Nix-dev] Nix OS installation problems - Where's the hard drive?

2014-10-10 Thread David Guibert
{ >kernelExtraConfig = "CONFIG_SCSI_SAS_ATA y" ; > }; >}; > }; In both cases, the option in NixOS is "SCSI_SAS_ATA". Remove "CONFIG_" to your configuration.nix because it's added by the .config generator. -- Best regards, David ___ nix-dev mailing list nix-dev@lists.science.uu.nl http://lists.science.uu.nl/mailman/listinfo/nix-dev

Re: [Nix-dev] called without required argument `cinnamon-settings-daemon'

2013-12-05 Thread David Guibert
On Thu, Dec 5, 2013 at 2:13 PM, Roelof Wobben wrote: > cinnamon-setttings-daemon = > ../desktops/cinnamon/cinnamon-settings-daemon.nix { } ; callPackage is missing. ___ nix-dev mailing list nix-dev@lists.science.uu.nl http://lists.science.uu.nl/mai

Re: [Nix-dev] A generic wrapper method (possibly)

2013-12-02 Thread David Guibert
i-tcp/argv0.html -- Regards, David ___ nix-dev mailing list nix-dev@lists.science.uu.nl http://lists.science.uu.nl/mailman/listinfo/nix-dev

[Nix-dev] compiling firefox 20 with sqlite_3_7_16_1

2013-04-28 Thread David Guibert
ite; }).deepOverride { sqlite = sqlite_3_7_16_1; }; But pysqlite is still using the default sqlite package. How could we override the sqlite attribute? -- Regards, David ___ nix-dev mailing list nix-dev@lists.science.uu.nl http://lists.science.uu

Re: [Nix-dev] nix-build broken in nix-1.2

2012-12-13 Thread David Guibert
On Wed, Dec 12, 2012 at 1:25 PM, David Guibert wrote: > I used to build derivations with nix-build and testing them via the > result directory. > But with the new nix 1.2, the derivations are no longer built. > $ /nix/store/jbhg56ranx6ja63rw7ysld6nyw6hc8i4-nix-1.2/bin/nix-build -v

Re: [Nix-dev] SVN commit r32596

2012-03-13 Thread David Guibert
postInstall = '' +wrapProgram $out/bin/xml2po --prefix PYTHONPATH : $(toPythonPath $out) \ + ''${PYTHONPATH:+ --prefix PYTHONPATH : $PYTHONPATH} \ + ''; buildNativeInputs = [ pkgconfig intltool pythonPackages.wrapPython ]; } -- Regards, David

Re: [Nix-dev] [Nix-commits] SVN commit: nix - r30307 - nixpkgs/trunk/pkgs/development/libraries/zlib

2011-11-08 Thread David Guibert
vel_madler.net/2011-June/002583.html > > That patch includes, among others pieces, the ifdef/ifndef trick. Maybe we can > take directly that patch. Indeed, much better. -- David ___ nix-dev mailing list nix-dev@lists.science.uu.nl http://lists.science.uu.nl/mailman/listinfo/nix-dev

Re: [Nix-dev] [Nix-commits] SVN commit: nix - r30307 - nixpkgs/trunk/pkgs/development/libraries/zlib

2011-11-08 Thread David Guibert
Hi, 2011/11/7 Lluís Batlle i Rossell : > On Mon, Nov 07, 2011 at 05:08:09PM -0500, Eelco Dolstra wrote: >> On 11/07/2011 04:33 PM, David Guibert wrote: >> >> > Added: >> >     >> > nixpkgs/trunk/pkgs/development/libraries/zlib/zlib-LARGEFILE64_SOURCE.

Re: [Nix-dev] cmake broken on Linux/x86 (was: SVN commit: nix - r30278 - nixpkgs/trunk/pkgs/development/tools/build-managers/cmake)

2011-11-07 Thread David Guibert
On Mon, Nov 7, 2011 at 6:33 PM, David Guibert wrote: > On Mon, Nov 7, 2011 at 6:23 PM, Peter Simons wrote: >>  > update cmake >> >> that update seems to have broken CMake builds on various platforms: >> >>  http://hydra.nixos.org/job/nixpkgs/trunk/cmake > &

[Nix-commits] SVN commit: nix - r30307 - nixpkgs/trunk/pkgs/development/libraries/zlib

2011-11-07 Thread David Guibert
Author: guibert Date: Mon Nov 7 21:33:37 2011 New Revision: 30307 URL: https://nixos.org/websvn/nix/?rev=30307&sc=1 Log: fix _LARGEFILE64_SOURCE in zlib Added: nixpkgs/trunk/pkgs/development/libraries/zlib/zlib-LARGEFILE64_SOURCE.patch Modified: nixpkgs/trunk/pkgs/development/libraries/zli

Re: [Nix-dev] cmake broken on Linux/x86 (was: SVN commit: nix - r30278 - nixpkgs/trunk/pkgs/development/tools/build-managers/cmake)

2011-11-07 Thread David Guibert
ypes. I'll fix it tonight with the following patch http://foundry.supelec.fr/gf/project/luatex/scmsvn/?action=browse&path=%2Ftrunk%2Fsource%2Flibs%2Fzlib%2Fzlib-1.2.5-PATCHES%2Fpatch-01-LARGEFILE64_SOURCE&view=markup -- Regards, David _

Re: [Nix-dev] [Nix-commits] SVN commit: nix - r30279 - in nixpkgs/trunk/pkgs: development/libraries/json-c servers/pulseaudio top-level

2011-11-07 Thread David Guibert
Hi, On Sun, Nov 6, 2011 at 10:51 PM, Eelco Dolstra wrote: > On 11/06/2011 03:03 PM, David Guibert wrote: > >> -  name = "pulseaudio-0.9.23"; >> +  name = "pulseaudio-1.1"; > >> -      #gtk gconf libX11 libICE libSM libXtst libXi >> +      x

[Nix-commits] SVN commit: nix - r30279 - in nixpkgs/trunk/pkgs: development/libraries/json-c servers/pulseaudio top-level

2011-11-06 Thread David Guibert
Author: guibert Date: Sun Nov 6 20:03:07 2011 New Revision: 30279 URL: https://nixos.org/websvn/nix/?rev=30279&sc=1 Log: update pulseaudio 0.9.23 -> 1.1 Added: nixpkgs/trunk/pkgs/development/libraries/json-c/ nixpkgs/trunk/pkgs/development/libraries/json-c/default.nix Modified: nixpkgs/

[Nix-commits] SVN commit: nix - r30278 - nixpkgs/trunk/pkgs/development/tools/build-managers/cmake

2011-11-06 Thread David Guibert
Author: guibert Date: Sun Nov 6 20:03:00 2011 New Revision: 30278 URL: https://nixos.org/websvn/nix/?rev=30278&sc=1 Log: update cmake Modified: nixpkgs/trunk/pkgs/development/tools/build-managers/cmake/default.nix Modified: nixpkgs/trunk/pkgs/development/tools/build-managers/cmake/default.ni

[Nix-commits] SVN commit: nix - r30168 - in nixpkgs/trunk/pkgs: development/libraries/libjson top-level

2011-11-01 Thread David Guibert
Author: guibert Date: Tue Nov 1 17:07:14 2011 New Revision: 30168 URL: https://nixos.org/websvn/nix/?rev=30168&sc=1 Log: add libjson library Added: nixpkgs/trunk/pkgs/development/libraries/libjson/ nixpkgs/trunk/pkgs/development/libraries/libjson/default.nix Modified: nixpkgs/trunk/pkgs

[Nix-commits] SVN commit: nix - r30167 - nixpkgs/trunk/pkgs/development/tools/misc/lsof

2011-11-01 Thread David Guibert
Author: guibert Date: Tue Nov 1 17:07:07 2011 New Revision: 30167 URL: https://nixos.org/websvn/nix/?rev=30167&sc=1 Log: lsof 2.84 -> 2.85 Modified: nixpkgs/trunk/pkgs/development/tools/misc/lsof/default.nix Modified: nixpkgs/trunk/pkgs/development/tools/misc/lsof/default.nix ===

[Nix-commits] SVN commit: nix - r30166 - in nixpkgs/trunk/pkgs/development/libraries: libgcrypt libgpg-error

2011-11-01 Thread David Guibert
Author: guibert Date: Tue Nov 1 17:06:58 2011 New Revision: 30166 URL: https://nixos.org/websvn/nix/?rev=30166&sc=1 Log: update libgcrypt 1.4.6 -> 1.5.0 Modified: nixpkgs/trunk/pkgs/development/libraries/libgcrypt/default.nix nixpkgs/trunk/pkgs/development/libraries/libgpg-error/default.ni

[Nix-commits] SVN commit: nix - r29392 - nixos/trunk/modules/services/misc

2011-09-20 Thread David Guibert
Author: guibert Date: Tue Sep 20 07:14:24 2011 New Revision: 29392 URL: https://ssl.nixos.org/websvn/nix/?rev=29392&sc=1 Log: autofs: add sshfs to PATH Modified: nixos/trunk/modules/services/misc/autofs.nix Modified: nixos/trunk/modules/services/misc/autofs.nix ===

[Nix-commits] SVN commit: nix - r29393 - nixos/trunk/modules/services/printing

2011-09-20 Thread David Guibert
Author: guibert Date: Tue Sep 20 07:14:27 2011 New Revision: 29393 URL: https://ssl.nixos.org/websvn/nix/?rev=29393&sc=1 Log: cups: fix smb backend Modified: nixos/trunk/modules/services/printing/cupsd.nix Modified: nixos/trunk/modules/services/printing/cupsd.nix =

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