Hi Catherine,
One problem with sliding window algorithms is that the straightforward
approach can be very inefficient. Ideally you would want to not recompute
your windowed quantity from all points in the window, but to reuse the
result from an overlapping window and only take into account the poi
one other note:
As a rule, using numpy array operations from Cython doesn't buy you much,
as you discovered. YOu need to use numpy arrays as n-d containers, and
write the loops yourself.
You may want to check out numba as another alternative -- it DOES optimize
numpy operations.
-CHB
On Wed,
sorry, not enough time to look closely, but a couple general comments:
On Wed, Mar 28, 2018 at 5:56 PM, Moroney, Catherine M (398E) <
catherine.m.moro...@jpl.nasa.gov> wrote:
> I have the following sample code (pretty simple algorithm that uses a
> rolling filter window) and am wondering what the
Install snakeviz to visualize what’s taking all the time.
You might want to check out numba.jit(nopython) for optimizing specific
sections.
On Wed, Mar 28, 2018 at 9:10 PM Joseph Fox-Rabinovitz <
jfoxrabinov...@gmail.com> wrote:
> It looks like you are creating a coastline mask (or a coastline
